RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 CKS2P33552 79 aa4.8□□□□□ -1.64
CPS1-210ENST00000518043 RAB5BP61020 215 aa4.8□□□□□ -1.64
CPS1-210ENST00000518043 DEFA6Q01524 100 aa4.8□□□□□ -1.64
CPS1-210ENST00000518043 ZNF56Q15929 161 aa4.8□□□□□ -1.64
CPS1-210ENST00000518043 OR4C5Q8NGB2 326 aa4.8□□□□□ -1.64
CPS1-210ENST00000518043 A0A096LNJ9 63 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 LOC100131303A0A0U1RQF7 123 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 SERF1AO75920 110 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 ESDP10768 282 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 POLR2KP53803 58 aaKnown RBP4.79□□□□□ -1.64
CPS1-210ENST00000518043 SLC25A29Q8N8R3 303 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 NEXN-AS1Q8NBZ9 246 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 VSIG2Q96IQ7 327 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 LAMTOR2Q9Y2Q5 125 aa4.79□□□□□ -1.64
CPS1-210ENST00000518043 TRGV2A0A075B6R0 118 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 C5orf52A6NGY3 159 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 IFI27P40305 119 aaPredicted RBP4.78□□□□□ -1.64
CPS1-210ENST00000518043 NDUFA6P56556 154 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 RPL32P62910 135 aaKnown RBP4.78□□□□□ -1.64
CPS1-210ENST00000518043 OR10J3Q5JRS4 329 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 SMIM15Q7Z3B0 74 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 NEGR1Q7Z3B1 354 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 SMIM2Q9BVW6 85 aa4.78□□□□□ -1.64
CPS1-210ENST00000518043 TRBV27A0A0K0K1C4 114 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 TRBV6-4A0A1B0GX49 114 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 K7EQD1 137 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 TSHBP01222 138 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 CRYBA4P53673 196 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 NANOS2P60321 138 aaKnown RBP4.77□□□□□ -1.65
CPS1-210ENST00000518043 UBE2D3P61077 147 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 DAD1P61803 113 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 SNRPEP62304 92 aaKnown RBP4.77□□□□□ -1.65
CPS1-210ENST00000518043 UBE2D2P62837 147 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 Q6ZTC4 211 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 HIST3H2BBQ8N257 126 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 Q8N8P6 123 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
CPS1-210ENST00000518043 C20orf78Q9BR46 151 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 TMEM70Q9BUB7 260 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 NIT2Q9NQR4 276 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
CPS1-210ENST00000518043 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 TRBV10-1A0A0K0K1A3 114 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 LOC389332A0A1B0GUA5 103 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 SDHAF1A6NFY7 115 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 CIDEAO60543 219 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 ATP5G1P05496 136 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 NIT1Q86X76 327 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 PRR26Q8N8Z3 221 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 MAP1LC3AQ9H492 121 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 ST20Q9HBF5 79 aa4.76□□□□□ -1.65
CPS1-210ENST00000518043 PLECQ15149 4684 aaKnown RBP4.75□□□□□ -1.65
CPS1-210ENST00000518043 TRGV4A0A0C4DH28 118 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 IGHV1-24A0A0C4DH33 117 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 H7C1H1 209 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 TCAPO15273 167 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 RHOHQ15669 191 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 PMCHL1Q16048 86 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 RNASEKQ6P5S7 137 aaKnown RBP4.75□□□□□ -1.65
CPS1-210ENST00000518043 BAGE3Q86Y29 109 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 C11orf45Q8TAV5 145 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 DEFB104AQ8WTQ1 72 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 DNAJC30Q96LL9 226 aa4.75□□□□□ -1.65
CPS1-210ENST00000518043 TRAV26-1A0A087WT03 109 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 IGHV3-38A0A0C4DH36 116 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 A0A0J9YY99 117 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 PPP1R17O96001 155 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 LINC00614P0C842 121 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 GAGE1Q13065 139 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 GAGE4Q13068 117 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 GAGE5Q13069 117 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 PDZD11Q5EBL8 140 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 NTM-AS1Q6ZSK4 140 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 LINC00173Q6ZV60 143 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 FAM19A2Q8N3H0 131 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 ZNRF2Q8NHG8 242 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 FAM104AQ969W3 186 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 CHCHD1Q96BP2 118 aaKnown RBP4.74□□□□□ -1.65
CPS1-210ENST00000518043 HIST1H2BLQ99880 126 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 CHCHD7Q9BUK0 85 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
CPS1-210ENST00000518043 PRO0255Q9UI72 69 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 HHLA3Q9XRX5 114 aa4.74□□□□□ -1.65
CPS1-210ENST00000518043 TRBV7-3A0A075B6L6 115 aa4.73□□□□□ -1.65
CPS1-210ENST00000518043 F5H768 121 aa4.73□□□□□ -1.65
CPS1-210ENST00000518043 VCYO14598 125 aa4.73□□□□□ -1.65
CPS1-210ENST00000518043 HTN3P15516 51 aa4.73□□□□□ -1.65
CPS1-210ENST00000518043 PMCHP20382 165 aa4.73□□□□□ -1.65
CPS1-210ENST00000518043 AMTP48728 403 aa4.73□□□□□ -1.65
CPS1-210ENST00000518043 FA2HQ7L5A8 372 aa4.73□□□□□ -1.65
CPS1-210ENST00000518043 PHLDA1Q8WV24 401 aaPredicted RBP4.73□□□□□ -1.65
CPS1-210ENST00000518043 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
CPS1-210ENST00000518043 A0A096LPF7 62 aa4.72□□□□□ -1.65
CPS1-210ENST00000518043 USP17L23D6RBM5 183 aa4.72□□□□□ -1.65
CPS1-210ENST00000518043 I3L3M4 83 aa4.72□□□□□ -1.65
CPS1-210ENST00000518043 S100A6P06703 90 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms