RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 H7C1H1 209 aa6.97□□□□□ -1.29
CTNNA1-205ENST00000517904 CHCHD10Q8WYQ3 142 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-205ENST00000517904 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 UBE2L6O14933 153 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 PAGE4O60829 102 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 AKR1C8PQ5T2L2 129 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 RASL11AQ6T310 242 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 BAGE2Q86Y30 109 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 ALG5Q9Y673 324 aa6.96□□□□□ -1.3
CTNNA1-205ENST00000517904 BORCS7-ASMTA0A0B4J1R7 106 aa6.95□□□□□ -1.3
CTNNA1-205ENST00000517904 FAM231BA6NCW3 169 aa6.95□□□□□ -1.3
CTNNA1-205ENST00000517904 IGLC6P0CF74 106 aa6.95□□□□□ -1.3
CTNNA1-205ENST00000517904 AMTP48728 403 aa6.95□□□□□ -1.3
CTNNA1-205ENST00000517904 FOXI1Q12951 378 aa6.95□□□□□ -1.3
CTNNA1-205ENST00000517904 LINC00526Q96FQ7 95 aa6.95□□□□□ -1.3
CTNNA1-205ENST00000517904 TPPP3Q9BW30 176 aa6.95□□□□□ -1.3
CTNNA1-205ENST00000517904 S100A9P06702 114 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-205ENST00000517904 COTL1Q14019 142 aa6.94□□□□□ -1.3
CTNNA1-205ENST00000517904 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
CTNNA1-205ENST00000517904 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
CTNNA1-205ENST00000517904 FER1L6-AS1Q8NA97 138 aa6.93□□□□□ -1.3
CTNNA1-205ENST00000517904 CARD19Q96LW7 228 aa6.93□□□□□ -1.3
CTNNA1-205ENST00000517904 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
CTNNA1-205ENST00000517904 GHRHP01286 108 aa6.92□□□□□ -1.3
CTNNA1-205ENST00000517904 DEFA1P59665 94 aa6.92□□□□□ -1.3
CTNNA1-205ENST00000517904 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
CTNNA1-205ENST00000517904 PSORS1C2Q9UIG4 136 aa6.92□□□□□ -1.3
CTNNA1-205ENST00000517904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 FXYD6-FXYD2A0A087WZ82 144 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 A0A1W2PNN7 141 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 IGKV2-29A2NJV5 120 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 XCL1P47992 114 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 Q6ZNX1 250 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 TMUB2Q71RG4 321 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 MED28Q9H204 178 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 PKIGQ9Y2B9 76 aa6.91□□□□□ -1.3
CTNNA1-205ENST00000517904 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
CTNNA1-205ENST00000517904 A0A1B0GV50 99 aa6.9□□□□□ -1.3
CTNNA1-205ENST00000517904 NTF3P20783 257 aa6.9□□□□□ -1.3
CTNNA1-205ENST00000517904 RPL35P42766 123 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-205ENST00000517904 CACNG7P62955 275 aa6.9□□□□□ -1.3
CTNNA1-205ENST00000517904 AMMECR1LQ6DCA0 310 aa6.9□□□□□ -1.3
CTNNA1-205ENST00000517904 RNASEKQ6P5S7 137 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-205ENST00000517904 TRAV26-2A0A0B4J265 109 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 IGHV1-58A0A0C4DH39 117 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 CCL25O15444 150 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 GIPP09681 153 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 FGF6P10767 208 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 LYZL1Q6UWQ5 148 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 OR2D3Q8NGH3 330 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 SFT2D1Q8WV19 159 aa6.89□□□□□ -1.31
CTNNA1-205ENST00000517904 C19orf71A6NCJ1 209 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 G3V3Q6 166 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 PFDN1O60925 122 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 MT-ND6P03923 174 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 C1orf137Q5JT78 98 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
CTNNA1-205ENST00000517904 LOC107984640A0A0U1RRK4 108 aa6.87□□□□□ -1.31
CTNNA1-205ENST00000517904 LINC00959A0A1B0GUT2 108 aa6.87□□□□□ -1.31
CTNNA1-205ENST00000517904 H7C423 109 aa6.87□□□□□ -1.31
CTNNA1-205ENST00000517904 BCL2P10415 239 aa6.87□□□□□ -1.31
CTNNA1-205ENST00000517904 CENPWQ5EE01 88 aa6.87□□□□□ -1.31
CTNNA1-205ENST00000517904 FAM213BQ8TBF2 198 aa6.87□□□□□ -1.31
CTNNA1-205ENST00000517904 RPL39LQ96EH5 51 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-205ENST00000517904 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 F2Z2F3 143 aa6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 NCR2O95944 276 aa6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 APCSP02743 223 aa6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 CAMPP49913 170 aa6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 KCNRGQ8N5I3 272 aa6.86□□□□□ -1.31
CTNNA1-205ENST00000517904 IGLV4-69A0A075B6H9 119 aa6.85□□□□□ -1.31
CTNNA1-205ENST00000517904 ARPC5O15511 151 aa6.85□□□□□ -1.31
CTNNA1-205ENST00000517904 ZNF25P17030 456 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-205ENST00000517904 PRR4Q16378 134 aa6.85□□□□□ -1.31
CTNNA1-205ENST00000517904 C11orf52Q96A22 123 aa6.85□□□□□ -1.31
CTNNA1-205ENST00000517904 RAB19A4D1S5 217 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 SDHAF1A6NFY7 115 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 IFNA1P01562 189 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 IGLV7-43P04211 117 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 CTRLP40313 264 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 MEF2BQ02080 365 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 TWIST1Q15672 202 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 C9orf62Q8N4C0 152 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms