RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TSPAN19P0C672 248 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 RNASE2P10153 161 aaKnown RBP1.54□□□□□ -2.16
CPNE3-204ENST00000517862 DR1Q01658 176 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
CPNE3-204ENST00000517862 GDF5OSQ5U4N7 250 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 AADACL3Q5VUY0 350 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 OR51T1Q8NGJ9 327 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 MRPL30Q8TCC3 161 aaKnown RBP1.54□□□□□ -2.16
CPNE3-204ENST00000517862 DCANP1Q8TF63 244 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 ARL11Q969Q4 196 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 CCDC90BQ9GZT6 254 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 TMEM56-RWDD3S4R434 201 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 IGLV10-54A0A075B6I4 117 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 G3V3Q6 166 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 GNRH2O43555 120 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 SMIM24O75264 130 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 PIAS1O75925 651 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 IGKV1-5P01602 117 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 GZMHP20718 246 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 RPS27P42677 84 aaKnown RBP1.53□□□□□ -2.16
CPNE3-204ENST00000517862 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
CPNE3-204ENST00000517862 RPL38P63173 70 aaKnown RBP1.53□□□□□ -2.16
CPNE3-204ENST00000517862 CCL20P78556 96 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 PSG9Q00887 426 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 TRIQKQ629K1 86 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 ZNF833PQ6ZTB9 187 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 GOLT1AQ6ZVE7 132 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 BPIFA4PQ86YQ2 179 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 Q8IYB0 196 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 C12orf45Q8N5I9 185 aaPredicted RBP1.53□□□□□ -2.16
CPNE3-204ENST00000517862 OR8D4Q8NGM9 314 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 TMEM167AQ8TBQ9 72 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 Q96M85 177 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 DERL1Q9BUN8 251 aa1.53□□□□□ -2.16
CPNE3-204ENST00000517862 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 A0A1B0GW54 56 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 H0YJX3 145 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 ATG12O94817 140 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 NPYP01303 97 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 IFNA1P01562 189 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 IGKV1-16P04430 117 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H2BOP23527 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H2BBP33778 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 ZNF80P51504 273 aaPredicted RBP1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H2BDP58876 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 DEFB1P60022 68 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HSPE1P61604 102 aaKnown RBP1.52□□□□□ -2.17
CPNE3-204ENST00000517862 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
CPNE3-204ENST00000517862 RHOBP62745 196 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H2BCP62807 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 GNG5P63218 68 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 MIAQ16674 131 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST2H2BEQ16778 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.52□□□□□ -2.17
CPNE3-204ENST00000517862 SLC25A26Q70HW3 274 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 PFN4Q8NHR9 129 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 GNPDA2Q8TDQ7 276 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 TSKUQ8WUA8 353 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 DNAJC9Q8WXX5 260 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H2BHQ93079 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 TOMM6Q96B49 74 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 DNAJC30Q96LL9 226 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H2BNQ99877 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H2BMQ99879 126 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 PRO0255Q9UI72 69 aa1.52□□□□□ -2.17
CPNE3-204ENST00000517862 TMEM235A6NFC5 223 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 CPSF4LA6NMK7 179 aaKnown RBP1.51□□□□□ -2.17
CPNE3-204ENST00000517862 DEGS1O15121 323 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 DHFRP00374 187 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 PPBPP02775 128 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 RBP1P09455 135 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 SAA2P0DJI9 122 aaPredicted RBP1.51□□□□□ -2.17
CPNE3-204ENST00000517862 SULT1A3P0DMM9 295 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 SULT1A4P0DMN0 295 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 HIST1H1BP16401 226 aaKnown RBP1.51□□□□□ -2.17
CPNE3-204ENST00000517862 PPIBP23284 216 aaKnown RBP1.51□□□□□ -2.17
CPNE3-204ENST00000517862 ETV6P41212 452 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 EIF2B2P49770 351 aaKnown RBP1.51□□□□□ -2.17
CPNE3-204ENST00000517862 RAB14P61106 215 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 COX6A2Q02221 97 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 RHEBQ15382 184 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 RPL22L1Q6P5R6 122 aaKnown RBP1.51□□□□□ -2.17
CPNE3-204ENST00000517862 CLVS1Q8IUQ0 354 aaPredicted RBP1.51□□□□□ -2.17
CPNE3-204ENST00000517862 EXOC3-AS1Q8N2X6 119 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 CMTM2Q8TAZ6 248 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 SLAMF6Q96DU3 332 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 C2orf50Q96LR7 162 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 TXNDC17Q9BRA2 123 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 HHLA3Q9XRX5 114 aa1.51□□□□□ -2.17
CPNE3-204ENST00000517862 TRAV27A0A087WT01 109 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.5□□□□□ -2.17
CPNE3-204ENST00000517862 FABP5P3A8MUU1 101 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 C1orf196B1AJZ1 125 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 FNDC10F2Z333 226 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 TPST1O60507 370 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 CREBL2O60519 120 aaPredicted RBP1.5□□□□□ -2.17
CPNE3-204ENST00000517862 APOC1P02654 83 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 AKR1C1Q04828 323 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms