RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 GAGE12GP0CL81 117 aa9.1□□□□□ -0.95
PCM1-203ENST00000517545 GAGE12IP0CL82 117 aa9.1□□□□□ -0.95
PCM1-203ENST00000517545 GAGE4Q13068 117 aa9.1□□□□□ -0.95
PCM1-203ENST00000517545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.1□□□□□ -0.954e-24■■■■□ 23.3
PCM1-203ENST00000517545 Q9UF83 564 aa9.09□□□□□ -0.95
PCM1-203ENST00000517545 DOPEY2Q9Y3R5 2298 aa9.09□□□□□ -0.95
PCM1-203ENST00000517545 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
PCM1-203ENST00000517545 DUX3Q96PT4 197 aa9.09□□□□□ -0.95
PCM1-203ENST00000517545 NDUFA12Q9UI09 145 aa9.09□□□□□ -0.95
PCM1-203ENST00000517545 CREBBPQ92793 2442 aa9.08□□□□□ -0.96
PCM1-203ENST00000517545 HTN1P15515 57 aa9.08□□□□□ -0.96
PCM1-203ENST00000517545 DAND5Q8N907 189 aa9.08□□□□□ -0.96
PCM1-203ENST00000517545 LINC01600Q96MT4 127 aa9.08□□□□□ -0.96
PCM1-203ENST00000517545 BRI3O95415 125 aa9.08□□□□□ -0.96
PCM1-203ENST00000517545 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
PCM1-203ENST00000517545 H3BUA1 57 aa9.07□□□□□ -0.96
PCM1-203ENST00000517545 PRM2P04554 102 aa9.07□□□□□ -0.96
PCM1-203ENST00000517545 FLNCQ14315 2725 aa9.07□□□□□ -0.96
PCM1-203ENST00000517545 IGHV1-58A0A0C4DH39 117 aa9.07□□□□□ -0.96
PCM1-203ENST00000517545 IGLV1-40P01703 118 aa9.07□□□□□ -0.96
PCM1-203ENST00000517545 Q6Q795 121 aa9.06□□□□□ -0.96
PCM1-203ENST00000517545 C10orf99Q6UWK7 81 aa9.06□□□□□ -0.96
PCM1-203ENST00000517545 CELSR2Q9HCU4 2923 aa9.06□□□□□ -0.96
PCM1-203ENST00000517545 ZNF462Q96JM2 2506 aa9.06□□□□□ -0.96
PCM1-203ENST00000517545 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
PCM1-203ENST00000517545 A6NDX4 124 aa9.06□□□□□ -0.96
PCM1-203ENST00000517545 MIAQ16674 131 aa9.06□□□□□ -0.96
PCM1-203ENST00000517545 CSMD2Q7Z408 3487 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 KNCNA6PVL3 124 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 VSIG2Q96IQ7 327 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 SPANXDQ9BXN6 97 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 SPANXCQ9NY87 97 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 FAM208BQ5VWN6 2430 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 SPG11Q96JI7 2443 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 IGHV4-61A0A0C4DH41 118 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 K7EMT4 169 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 RBMY1A1P0DJD3 496 aaKnown RBP9.05□□□□□ -0.96
PCM1-203ENST00000517545 RBMY1CP0DJD4 496 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 RBMY1FQ15415 496 aaKnown RBP9.05□□□□□ -0.96
PCM1-203ENST00000517545 TMEM61Q8N0U2 210 aa9.05□□□□□ -0.96
PCM1-203ENST00000517545 CUBNO60494 3623 aa9.04□□□□□ -0.96
PCM1-203ENST00000517545 COX6CP09669 75 aa9.04□□□□□ -0.96
PCM1-203ENST00000517545 PYGO1Q9Y3Y4 419 aa9.04□□□□□ -0.96
PCM1-203ENST00000517545 CHD6Q8TD26 2715 aa9.04□□□□□ -0.96
PCM1-203ENST00000517545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
PCM1-203ENST00000517545 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
PCM1-203ENST00000517545 H3BT86 120 aa9.04□□□□□ -0.96
PCM1-203ENST00000517545 LST1O00453 97 aa9.04□□□□□ -0.96
PCM1-203ENST00000517545 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
PCM1-203ENST00000517545 CFHR3Q02985 330 aa9.03□□□□□ -0.96
PCM1-203ENST00000517545 K7EQG2 157 aa9.03□□□□□ -0.96
PCM1-203ENST00000517545 KLRB1Q12918 225 aa9.03□□□□□ -0.96
PCM1-203ENST00000517545 Q6ZSN1 163 aa9.03□□□□□ -0.96
PCM1-203ENST00000517545 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
PCM1-203ENST00000517545 DUX5Q96PT3 197 aa9.03□□□□□ -0.96
PCM1-203ENST00000517545 CHCHD5Q9BSY4 110 aa9.03□□□□□ -0.96
PCM1-203ENST00000517545 CENPEQ02224 2701 aa9.02□□□□□ -0.96
PCM1-203ENST00000517545 TRGV11A0A075B6L2 103 aa9.02□□□□□ -0.96
PCM1-203ENST00000517545 C3orf56Q8N813 242 aa9.02□□□□□ -0.96
PCM1-203ENST00000517545 LRRK2Q5S007 2527 aa9.02□□□□□ -0.97
PCM1-203ENST00000517545 CHCHD7Q9BUK0 85 aa9.02□□□□□ -0.97
PCM1-203ENST00000517545 TNFRSF18Q9Y5U5 241 aa9.02□□□□□ -0.97
PCM1-203ENST00000517545 IGHV3-38A0A0C4DH36 116 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 TINCRA0A1B0GVN0 87 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 C19orf84I3L1E1 186 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 UBE2D4Q9Y2X8 147 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 A0A0U1RRA0 63 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 SYNJ2BPP57105 145 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.01□□□□□ -0.97
PCM1-203ENST00000517545 CITED2Q99967 270 aaPredicted RBP9.01□□□□□ -0.97
PCM1-203ENST00000517545 LINC00467Q9BRT7 94 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 PRORYQ9H606 182 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 CDKN2A-AS1Q9UH64 79 aa9.01□□□□□ -0.97
PCM1-203ENST00000517545 MEIG1Q5JSS6 88 aa9□□□□□ -0.97
PCM1-203ENST00000517545 PSMB8P28062 276 aa9□□□□□ -0.97
PCM1-203ENST00000517545 USP9XQ93008 2570 aaPredicted RBP9□□□□□ -0.97
PCM1-203ENST00000517545 ZNF625Q96I27 306 aaPredicted RBP8.99□□□□□ -0.97
PCM1-203ENST00000517545 DEFB121Q5J5C9 76 aa8.99□□□□□ -0.97
PCM1-203ENST00000517545 NACAE9PAV3 2078 aa8.99□□□□□ -0.97
PCM1-203ENST00000517545 HERV-K104P63124 156 aa8.99□□□□□ -0.97
PCM1-203ENST00000517545 FAM240AA0A1B0GVK7 77 aa8.98□□□□□ -0.97
PCM1-203ENST00000517545 AVPP01185 164 aa8.98□□□□□ -0.97
PCM1-203ENST00000517545 YAE1D1Q9NRH1 226 aa8.98□□□□□ -0.97
PCM1-203ENST00000517545 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
PCM1-203ENST00000517545 MRPL23Q16540 153 aaKnown RBP8.98□□□□□ -0.97
PCM1-203ENST00000517545 SHISA2Q6UWI4 295 aa8.98□□□□□ -0.97
PCM1-203ENST00000517545 TMEM101Q96IK0 257 aa8.98□□□□□ -0.97
PCM1-203ENST00000517545 SPANXA1Q9NS26 97 aa8.97□□□□□ -0.97
PCM1-203ENST00000517545 COX6A2Q02221 97 aa8.97□□□□□ -0.97
PCM1-203ENST00000517545 EDA2RQ9HAV5 297 aa8.96□□□□□ -0.97
PCM1-203ENST00000517545 TRBV7-7A0A0K0K1E9 115 aa8.96□□□□□ -0.98
PCM1-203ENST00000517545 Q8N2B8 174 aa8.96□□□□□ -0.98
PCM1-203ENST00000517545 PRB1P04280 392 aa8.96□□□□□ -0.98
PCM1-203ENST00000517545 SMCR5Q8TEV8 140 aa8.96□□□□□ -0.98
PCM1-203ENST00000517545 FAM110AQ9BQ89 295 aa8.96□□□□□ -0.98
PCM1-203ENST00000517545 NDUFA1O15239 70 aa8.95□□□□□ -0.98
PCM1-203ENST00000517545 LINC00308Q8TCZ7 52 aa8.95□□□□□ -0.98
PCM1-203ENST00000517545 PIMREGQ9BSJ6 248 aa8.95□□□□□ -0.98
PCM1-203ENST00000517545 Q9H8V8 135 aa8.95□□□□□ -0.98
PCM1-203ENST00000517545 FAM236AA0A1B0GUQ0 79 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms