RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 COX7A2LO14548 114 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 TSHBP01222 138 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 ELANEP08246 267 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 TSPEAR-AS2P59090 65 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 BLCAPP62952 87 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 DAND5Q8N907 189 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 LST1O00453 97 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 TIMM17BO60830 172 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 NXPH4O95158 308 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 PTPRBP23467 1997 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 IGHV3-53P01767 116 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 TMEM243Q9BU79 118 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 ADORA2A-AS1P86434 159 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 C11orf71Q6IPW1 123 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 CREBBPQ92793 2442 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 H0YGX0 51 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 J3KT08 172 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 CRYGDP07320 174 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 CMC4P56277 68 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-203ENST00000517490 C9orf85Q96MD7 179 aa4.97□□□□□ -1.61
CPNE3-203ENST00000517490 H7C423 109 aa4.96□□□□□ -1.61
CPNE3-203ENST00000517490 UQCRQO14949 82 aa4.96□□□□□ -1.61
CPNE3-203ENST00000517490 CRIP2P52943 208 aaPredicted RBP4.96□□□□□ -1.61
CPNE3-203ENST00000517490 LMO4P61968 165 aa4.96□□□□□ -1.61
CPNE3-203ENST00000517490 TMEM61Q8N0U2 210 aa4.96□□□□□ -1.61
CPNE3-203ENST00000517490 A6NDX4 124 aa4.96□□□□□ -1.62
CPNE3-203ENST00000517490 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
CPNE3-203ENST00000517490 CEMP1Q6PRD7 247 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-203ENST00000517490 SBSPONQ8IVN8 264 aa4.96□□□□□ -1.62
CPNE3-203ENST00000517490 IGHV4-38-2P0DP08 117 aa4.96□□□□□ -1.62
CPNE3-203ENST00000517490 PKIGQ9Y2B9 76 aa4.96□□□□□ -1.62
CPNE3-203ENST00000517490 NBASA2RRP1 2371 aa4.96□□□□□ -1.62
CPNE3-203ENST00000517490 HOXD3P31249 432 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-203ENST00000517490 UBE2E2Q96LR5 201 aa4.96□□□□□ -1.62
CPNE3-203ENST00000517490 NDUFA1O15239 70 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 FAM110AQ9BQ89 295 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 XCL2Q9UBD3 114 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 AGRNO00468 2067 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 LINC01356Q8N9X3 169 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 MRPS36P82909 103 aaKnown RBP4.95□□□□□ -1.62
CPNE3-203ENST00000517490 C3orf22Q8N5N4 141 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 C3orf56Q8N813 242 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 ESM1Q9NQ30 184 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 K7EQG2 157 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 LINC00308Q8TCZ7 52 aa4.95□□□□□ -1.62
CPNE3-203ENST00000517490 SPTAN1Q13813 2472 aaKnown RBP4.94□□□□□ -1.62
CPNE3-203ENST00000517490 IGHV4-61A0A0C4DH41 118 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
CPNE3-203ENST00000517490 DAZ4Q86SG3 579 aaKnown RBP4.94□□□□□ -1.62
CPNE3-203ENST00000517490 DAZ3Q9NR90 486 aaKnown RBP4.94□□□□□ -1.62
CPNE3-203ENST00000517490 CDKN2A-AS1Q9UH64 79 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 COL6A6A6NMZ7 2263 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 PFN2P35080 140 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 ORMDL1Q9P0S3 153 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 KIF25-AS1Q9Y6Z4 181 aa4.94□□□□□ -1.62
CPNE3-203ENST00000517490 BRCA2P51587 3418 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 A0A1B0GX51 115 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 SS18Q15532 418 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 J3QLI3 93 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 LY6DQ14210 128 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 NRGNQ92686 78 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 C11orf68Q9H3H3 251 aaKnown RBP4.93□□□□□ -1.62
CPNE3-203ENST00000517490 IGHV4-59P01825 116 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 POM121L12Q8N7R1 296 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 LINC00467Q9BRT7 94 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 TRANK1O15050 2925 aa4.93□□□□□ -1.62
CPNE3-203ENST00000517490 K7EQD1 137 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 GNLYP22749 145 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 APRG1Q8IVJ8 170 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 CRLF1O75462 422 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 DEFB112Q30KQ8 113 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 C10orf105Q8TEF2 133 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 DCANP1Q8TF63 244 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 NDUFA7O95182 113 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 BRI3O95415 125 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 LAMTOR3Q9UHA4 124 aa4.92□□□□□ -1.62
CPNE3-203ENST00000517490 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 FAM229AH3BQW9 127 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 CXCL5P42830 114 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 LINC00315P59091 139 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 AMELXQ99217 191 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 UBE2D4Q9Y2X8 147 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 TRBV10-1A0A0K0K1A3 114 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 VPREB3Q9UKI3 123 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 IGLV1-40P01703 118 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 RBMY1FQ15415 496 aaKnown RBP4.91□□□□□ -1.62
CPNE3-203ENST00000517490 KLK9Q2XQG4 91 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 PIK3CD-AS1Q5SR53 167 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 FAM19A4Q96LR4 140 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 Q9HAA7 133 aa4.91□□□□□ -1.62
CPNE3-203ENST00000517490 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.62
CPNE3-203ENST00000517490 OTOGLQ3ZCN5 2332 aa4.9□□□□□ -1.62
CPNE3-203ENST00000517490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.9□□□□□ -1.625e-7■■■□□ 18.1
CPNE3-203ENST00000517490 TRBV7-7A0A0K0K1E9 115 aa4.9□□□□□ -1.63
CPNE3-203ENST00000517490 LECT2O14960 151 aa4.9□□□□□ -1.63
CPNE3-203ENST00000517490 SLURP1P55000 103 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms