RNA–Protein interactions for RNA: ENST00000517049.1

RNU6-1271P-201, Transcript of RNA, U6 small nuclear 1271, pseudogene, humanhuman

BASIC

Gene RNU6-1271P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1271P-201ENST00000517049 CETN3O15182 167 aa-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 SMIM6P0DI80 62 aa-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 SDC2P34741 201 aa-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 LTC4SQ16873 150 aa-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 LINC00305Q7Z4B0 112 aa-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 NUP35Q8NFH5 326 aa-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 NMNAT1Q9HAN9 279 aaPredicted RBP-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 ANKRD50Q9ULJ7 1429 aa-2.72□□□□□ -2.84
RNU6-1271P-201ENST00000517049 PATJQ8NI35 1801 aa-2.72□□□□□ -2.85
RNU6-1271P-201ENST00000517049 TRAV13-1A0A0B4J241 112 aa-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 PGRMC1O00264 195 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 DEFB1P60022 68 aa-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 LSM6P62312 80 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 KRTAP19-5Q3LI72 72 aa-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 HSD17B12Q53GQ0 312 aa-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SNX29P2Q8IUI4 249 aa-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 METTL1Q9UBP6 276 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CAMSAP1Q5T5Y3 1602 aa-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 KIF21AQ7Z4S6 1674 aa-2.73□□□□□ -2.85
RNU6-1271P-201ENST00000517049 MED23Q9ULK4 1368 aa-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 MYOM3Q5VTT5 1437 aa-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 MAGOHP61326 146 aaKnown RBP-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SMIM4Q8WVI0 70 aa-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 BTF3L4Q96K17 158 aa-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CCDC42Q96M95 316 aa-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SLC35B3Q9H1N7 401 aa-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 UFC1Q9Y3C8 167 aa-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 POLA1P09884 1462 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-1271P-201ENST00000517049 LRBAP50851 2863 aa-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 MYH3P11055 1940 aa-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 LINC00959A0A1B0GUT2 108 aa-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 M0QZK8 103 aa-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 RPS17P08708 135 aaKnown RBP-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 PHB2Q99623 299 aa-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SS18L2Q9UHA2 77 aa-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SSR3Q9UNL2 185 aa-2.75□□□□□ -2.85
RNU6-1271P-201ENST00000517049 TRBV7-6A0A0J9YX20 115 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 TRBV7-4A0A0J9YYF1 115 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 C9orf92A6NGG3 77 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 H3BMG7 143 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CCDC179H3BU77 68 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 M0R135 149 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 PPP1R2P41236 205 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SRP9P49458 86 aaKnown RBP-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CROCCP2Q86T23 111 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CNPY4Q8N129 248 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 C9orf16Q9BUW7 83 aa-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 LYRM2Q9NU23 88 aaPredicted RBP-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 NOP16Q9Y3C1 178 aaKnown RBP-2.76□□□□□ -2.85
RNU6-1271P-201ENST00000517049 UHRF1BP1LA0JNW5 1464 aa-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 PXDNQ92626 1479 aa-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 DNAH10Q8IVF4 4471 aa-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CTXND1A0A1B0GTU2 59 aa-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SLC25A5P05141 298 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 PIRTP0C851 137 aa-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 SH3BGRL3Q9H299 93 aa-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CBLN4Q9NTU7 201 aa-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 COL14A1Q05707 1796 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CICQ96RK0 1608 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-1271P-201ENST00000517049 CST2P09228 141 aa-2.78□□□□□ -2.85
RNU6-1271P-201ENST00000517049 MT1HL1P0DM35 61 aa-2.78□□□□□ -2.85
RNU6-1271P-201ENST00000517049 LSM3P62310 102 aaKnown RBP-2.78□□□□□ -2.85
RNU6-1271P-201ENST00000517049 TMEM170BQ5T4T1 132 aa-2.78□□□□□ -2.85
RNU6-1271P-201ENST00000517049 ARMC1Q9NVT9 282 aa-2.78□□□□□ -2.85
RNU6-1271P-201ENST00000517049 MARF1Q9Y4F3 1742 aaKnown RBP-2.79□□□□□ -2.86
RNU6-1271P-201ENST00000517049 UQCRQO14949 82 aa-2.79□□□□□ -2.86
RNU6-1271P-201ENST00000517049 S100A6P06703 90 aa-2.79□□□□□ -2.86
RNU6-1271P-201ENST00000517049 S100A11P31949 105 aa-2.79□□□□□ -2.86
RNU6-1271P-201ENST00000517049 VSTM2AQ8TAG5 236 aa-2.79□□□□□ -2.86
RNU6-1271P-201ENST00000517049 AMELXQ99217 191 aa-2.79□□□□□ -2.86
RNU6-1271P-201ENST00000517049 NDUFA12Q9UI09 145 aa-2.79□□□□□ -2.86
RNU6-1271P-201ENST00000517049 UBE2D3P61077 147 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 UBE2D2P62837 147 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 COTL1Q14019 142 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 COX17Q14061 63 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 AKR1C8PQ5T2L2 129 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 ATP6V0E2Q8NHE4 81 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 USMG5Q96IX5 58 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 NKIRAS1Q9NYS0 192 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 NWD2Q9ULI1 1742 aa-2.8□□□□□ -2.86
RNU6-1271P-201ENST00000517049 SETBP1Q9Y6X0 1596 aa-2.81□□□□□ -2.86
RNU6-1271P-201ENST00000517049 NKTRP30414 1462 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1271P-201ENST00000517049 K7EP34 96 aa-2.81□□□□□ -2.86
RNU6-1271P-201ENST00000517049 TCRAP04437 139 aa-2.81□□□□□ -2.86
RNU6-1271P-201ENST00000517049 PIPP12273 146 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1271P-201ENST00000517049 HRCT1Q6UXD1 115 aa-2.81□□□□□ -2.86
RNU6-1271P-201ENST00000517049 A2MP01023 1474 aa-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 J3QLW9 94 aa-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 ATG12O94817 140 aa-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 RPP14O95059 124 aaKnown RBP-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 PPP1R17O96001 155 aa-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 LINC01545Q5VT33 79 aa-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 Q6AWC8 147 aa-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 STOML2Q9UJZ1 356 aa-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 SPTBN5Q9NRC6 3674 aaKnown RBP-2.82□□□□□ -2.86
RNU6-1271P-201ENST00000517049 F8VRH5 84 aa-2.83□□□□□ -2.86
RNU6-1271P-201ENST00000517049 HIST1H1BP16401 226 aaKnown RBP-2.83□□□□□ -2.86
RNU6-1271P-201ENST00000517049 RPL22P35268 128 aaKnown RBP-2.83□□□□□ -2.86
RNU6-1271P-201ENST00000517049 LELP1Q5T871 98 aa-2.83□□□□□ -2.86
RNU6-1271P-201ENST00000517049 ATP6V1DQ9Y5K8 247 aa-2.83□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms