RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 NUP35Q8NFH5 326 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 USMG5Q96IX5 58 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 CHMP4BQ9H444 224 aaKnown RBP-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 MYOM3Q5VTT5 1437 aa-3.47□□□□□ -2.97
SCARNA23-201ENST00000516060 BOD1L1Q8NFC6 3051 aa-3.47□□□□□ -2.97
SCARNA23-201ENST00000516060 PPP5D1E7EU14 171 aa-3.48□□□□□ -2.97
SCARNA23-201ENST00000516060 CRYGSP22914 178 aa-3.48□□□□□ -2.97
SCARNA23-201ENST00000516060 PHB2Q99623 299 aa-3.48□□□□□ -2.97
SCARNA23-201ENST00000516060 ARHGEF12Q9NZN5 1544 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 CCDC179H3BU77 68 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 M0R135 149 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 SDC2P34741 201 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 CRYBA4P53673 196 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 UBE2D3P61077 147 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 UBE2D2P62837 147 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 GNG5P63218 68 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 CNPY4Q8N129 248 aa-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 NMNAT1Q9HAN9 279 aaPredicted RBP-3.49□□□□□ -2.97
SCARNA23-201ENST00000516060 TRAV13-1A0A0B4J241 112 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 ERICH2A1L162 156 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 H7C1C5 153 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 MT1BP07438 61 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 PIRTP0C851 137 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 PIPP12273 146 aaPredicted RBP-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 SRP9P49458 86 aaKnown RBP-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 LCN6P62502 163 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 TMED2Q15363 201 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 TMEM170BQ5T4T1 132 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 LINC00305Q7Z4B0 112 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 CROCCP2Q86T23 111 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 CTNNBIP1Q9NSA3 81 aaPredicted RBP-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 PRNDQ9UKY0 176 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 UFC1Q9Y3C8 167 aa-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 FAM32AQ9Y421 112 aaKnown RBP-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 SPTAN1Q13813 2472 aaKnown RBP-3.5□□□□□ -2.97
SCARNA23-201ENST00000516060 MED23Q9ULK4 1368 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 CTXND1A0A1B0GTU2 59 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 LINC00959A0A1B0GUT2 108 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 G3V2T6 193 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 GABARAPH6UMI1 98 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 ALX1Q15699 326 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 HSD17B12Q53GQ0 312 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 BTF3L4Q96K17 158 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 METTL1Q9UBP6 276 aaKnown RBP-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 PATJQ8NI35 1801 aa-3.51□□□□□ -2.97
SCARNA23-201ENST00000516060 CICQ96RK0 1608 aaPredicted RBP-3.52□□□□□ -2.97
SCARNA23-201ENST00000516060 F8VRH5 84 aa-3.52□□□□□ -2.97
SCARNA23-201ENST00000516060 H3BMG7 143 aa-3.52□□□□□ -2.97
SCARNA23-201ENST00000516060 CSN2P05814 226 aa-3.52□□□□□ -2.97
SCARNA23-201ENST00000516060 COTL1Q14019 142 aa-3.52□□□□□ -2.97
SCARNA23-201ENST00000516060 VSTM2AQ8TAG5 236 aa-3.52□□□□□ -2.97
SCARNA23-201ENST00000516060 C10orf82Q8WW14 230 aa-3.52□□□□□ -2.97
SCARNA23-201ENST00000516060 TRDV1A0A1B0GX56 115 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 MT1EP04732 61 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 S100A6P06703 90 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 COX17Q14061 63 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 LIN52Q52LA3 116 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 SNX29P2Q8IUI4 249 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 MT1MQ8N339 61 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 MYH8P13535 1937 aa-3.53□□□□□ -2.97
SCARNA23-201ENST00000516060 SETBP1Q9Y6X0 1596 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 SSSCA1O60232 199 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 PPP1R2P41236 205 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 HRCT1Q6UXD1 115 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 SLC35B3Q9H1N7 401 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 SSR3Q9UNL2 185 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 MYH2Q9UKX2 1941 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 UHRF1BP1LA0JNW5 1464 aa-3.54□□□□□ -2.98
SCARNA23-201ENST00000516060 CETN3O15182 167 aa-3.55□□□□□ -2.98
SCARNA23-201ENST00000516060 MAGOHP61326 146 aaKnown RBP-3.55□□□□□ -2.98
SCARNA23-201ENST00000516060 LTC4SQ16873 150 aa-3.55□□□□□ -2.98
SCARNA23-201ENST00000516060 DEFB110Q30KQ9 67 aa-3.55□□□□□ -2.98
SCARNA23-201ENST00000516060 NOP16Q9Y3C1 178 aaKnown RBP-3.55□□□□□ -2.98
SCARNA23-201ENST00000516060 R4GMQ9 66 aa-3.55□□□□□ -2.98
SCARNA23-201ENST00000516060 S4R3F8 94 aa-3.55□□□□□ -2.98
SCARNA23-201ENST00000516060 UQCRQO14949 82 aa-3.56□□□□□ -2.98
SCARNA23-201ENST00000516060 MT2AP02795 61 aa-3.56□□□□□ -2.98
SCARNA23-201ENST00000516060 SELENOSQ9BQE4 189 aa-3.56□□□□□ -2.98
SCARNA23-201ENST00000516060 LYRM2Q9NU23 88 aaPredicted RBP-3.56□□□□□ -2.98
SCARNA23-201ENST00000516060 KIF21AQ7Z4S6 1674 aa-3.56□□□□□ -2.98
SCARNA23-201ENST00000516060 TRBV7-6A0A0J9YX20 115 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 HSBP1L1C9JCN9 74 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 ARPC5O15511 151 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 SLC25A5P05141 298 aaKnown RBP-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 TPM2P07951 284 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 TPM1P09493 284 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 AKR1C8PQ5T2L2 129 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 ATP6V0E2Q8NHE4 81 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 MT1LQ93083 61 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 SH3BGRL3Q9H299 93 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 NDUFA4L2Q9NRX3 87 aa-3.57□□□□□ -2.98
SCARNA23-201ENST00000516060 PXDNQ92626 1479 aa-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 M0QZK8 103 aa-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 PPP1R17O96001 155 aa-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 SMR3BP02814 79 aaPredicted RBP-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 Q8N8P6 123 aa-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 CCDC42Q96M95 316 aa-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 CBLN4Q9NTU7 201 aa-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 STOML2Q9UJZ1 356 aa-3.58□□□□□ -2.98
SCARNA23-201ENST00000516060 ZFYVE9O95405 1425 aa-3.59□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms