RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 PLNP26678 52 aa6.73□□□□□ -1.33
TPM3-222ENST00000515609 UBE2D3P61077 147 aa6.73□□□□□ -1.33
TPM3-222ENST00000515609 PKIAP61925 76 aa6.73□□□□□ -1.33
TPM3-222ENST00000515609 UBE2D2P62837 147 aa6.73□□□□□ -1.33
TPM3-222ENST00000515609 DGAT2L7PQ6IED9 249 aa6.73□□□□□ -1.33
TPM3-222ENST00000515609 TIMM21Q9BVV7 248 aa6.73□□□□□ -1.33
TPM3-222ENST00000515609 VWFP04275 2813 aa6.72□□□□□ -1.33
TPM3-222ENST00000515609 TRBV25-1A0A075B6N4 114 aa6.72□□□□□ -1.33
TPM3-222ENST00000515609 TRAV26-1A0A087WT03 109 aa6.72□□□□□ -1.33
TPM3-222ENST00000515609 UBE2L6O14933 153 aa6.72□□□□□ -1.33
TPM3-222ENST00000515609 MRPL23Q16540 153 aaKnown RBP6.72□□□□□ -1.33
TPM3-222ENST00000515609 LINC01545Q5VT33 79 aa6.72□□□□□ -1.33
TPM3-222ENST00000515609 Q6ZSN1 163 aa6.72□□□□□ -1.33
TPM3-222ENST00000515609 TM2D3Q9BRN9 247 aa6.72□□□□□ -1.33
TPM3-222ENST00000515609 GAGE12JA6NER3 117 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 F5H768 121 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 H0Y8G0 127 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 K7EIL1 84 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 P0DMU3 169 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 FAM231AP0DMU4 169 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 FAM231CP0DMU5 169 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 ZNF25P17030 456 aaPredicted RBP6.71□□□□□ -1.34
TPM3-222ENST00000515609 GAGE1Q13065 139 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 GAGE4Q13068 117 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 GAGE5Q13069 117 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 TEX43Q6ZNM6 134 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 ATP6V0E2Q8NHE4 81 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 TMEM243Q9BU79 118 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 VCX2Q9H322 139 aa6.71□□□□□ -1.34
TPM3-222ENST00000515609 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
TPM3-222ENST00000515609 TRAV9-2A0A087WT02 112 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 A0A087WX48 190 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 IGIPA6NJ69 53 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 DEFB4AO15263 64 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 DPM2O94777 84 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 NHLRC4P0CG21 123 aaPredicted RBP6.7□□□□□ -1.34
TPM3-222ENST00000515609 GYPEP15421 78 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 PMVKQ15126 192 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 SBSPONQ8IVN8 264 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 C11orf45Q8TAV5 145 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 C2orf88Q9BSF0 95 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 ICOSQ9Y6W8 199 aa6.7□□□□□ -1.34
TPM3-222ENST00000515609 F8VRH5 84 aa6.69□□□□□ -1.34
TPM3-222ENST00000515609 SEC11AP67812 179 aa6.69□□□□□ -1.34
TPM3-222ENST00000515609 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
TPM3-222ENST00000515609 AMMECR1LQ6DCA0 310 aa6.69□□□□□ -1.34
TPM3-222ENST00000515609 MRPL52Q86TS9 123 aaKnown RBP6.69□□□□□ -1.34
TPM3-222ENST00000515609 MRAPQ8TCY5 172 aa6.69□□□□□ -1.34
TPM3-222ENST00000515609 PHLDA1Q8WV24 401 aaPredicted RBP6.69□□□□□ -1.34
TPM3-222ENST00000515609 B9D2Q9BPU9 175 aa6.69□□□□□ -1.34
TPM3-222ENST00000515609 TRBV6-8A0A0A6YYG3 113 aa6.68□□□□□ -1.34
TPM3-222ENST00000515609 IGKCP01834 107 aa6.68□□□□□ -1.34
TPM3-222ENST00000515609 LINC00173Q6ZV60 143 aa6.68□□□□□ -1.34
TPM3-222ENST00000515609 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
TPM3-222ENST00000515609 CHTOPQ9Y3Y2 248 aaKnown RBP6.68□□□□□ -1.34
TPM3-222ENST00000515609 NACAE9PAV3 2078 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 IGHV3-38A0A0C4DH36 116 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 A0A0J9YWU9 116 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 HTN3P15516 51 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 HERVK_113P61574 105 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 RPL39P62891 51 aaKnown RBP6.67□□□□□ -1.34
TPM3-222ENST00000515609 ODF1Q14990 250 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 C12orf74Q32Q52 190 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 BAALCQ8WXS3 180 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 CELA1Q9UNI1 258 aa6.67□□□□□ -1.34
TPM3-222ENST00000515609 TRAV10A0A0B4J240 114 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 PRSS29PA6NIE9 313 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 LINC00694P0DN24 101 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 TIRAPP58753 221 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 SPATA45Q537H7 98 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 Q8N976 141 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 PMCHL2Q9BQD1 86 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 CST9LQ9H4G1 147 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 RETNQ9HD89 108 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 PAM16Q9Y3D7 125 aa6.66□□□□□ -1.34
TPM3-222ENST00000515609 DEFB131BA0A096LNP1 70 aa6.65□□□□□ -1.34
TPM3-222ENST00000515609 CCL25O15444 150 aa6.65□□□□□ -1.34
TPM3-222ENST00000515609 PRB2P02812 416 aaPredicted RBP6.65□□□□□ -1.34
TPM3-222ENST00000515609 FGF6P10767 208 aa6.65□□□□□ -1.34
TPM3-222ENST00000515609 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.34
TPM3-222ENST00000515609 MRPL35Q9NZE8 188 aaKnown RBP6.65□□□□□ -1.34
TPM3-222ENST00000515609 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
TPM3-222ENST00000515609 TRAV8-6A0A0B4J262 113 aa6.64□□□□□ -1.35
TPM3-222ENST00000515609 A0A1B0GUV1 79 aa6.64□□□□□ -1.35
TPM3-222ENST00000515609 VSIG2Q96IQ7 327 aa6.64□□□□□ -1.35
TPM3-222ENST00000515609 AMELXQ99217 191 aa6.64□□□□□ -1.35
TPM3-222ENST00000515609 UQCR10Q9UDW1 63 aa6.64□□□□□ -1.35
TPM3-222ENST00000515609 Q9UF83 564 aa6.64□□□□□ -1.35
TPM3-222ENST00000515609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.63□□□□□ -1.35
TPM3-222ENST00000515609 A0A0J9YY99 117 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
TPM3-222ENST00000515609 H3BRM9 83 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 LELP1Q5T871 98 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms