RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 VCYO14598 125 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 POLR2KP53803 58 aaKnown RBP8.06□□□□□ -1.12
SNF8-215ENST00000515572 LAGE3Q14657 143 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 ELOBQ15370 118 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 TMEM136Q6ZRR5 245 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 LINC00336Q6ZUF6 198 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 LAMTOR2Q9Y2Q5 125 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 RYR3Q15413 4870 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 IBA57-AS1B1ANH7 110 aa8.05□□□□□ -1.12
SNF8-215ENST00000515572 TNFRSF6BO95407 300 aa8.05□□□□□ -1.12
SNF8-215ENST00000515572 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
SNF8-215ENST00000515572 RPL32P62910 135 aaKnown RBP8.05□□□□□ -1.12
SNF8-215ENST00000515572 KIR2DL4Q99706 377 aa8.05□□□□□ -1.12
SNF8-215ENST00000515572 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
SNF8-215ENST00000515572 UBE2L6O14933 153 aa8.04□□□□□ -1.12
SNF8-215ENST00000515572 RTL8CO15255 209 aa8.04□□□□□ -1.12
SNF8-215ENST00000515572 TCAPO15273 167 aa8.04□□□□□ -1.12
SNF8-215ENST00000515572 NPYP01303 97 aa8.04□□□□□ -1.12
SNF8-215ENST00000515572 APCSP02743 223 aa8.04□□□□□ -1.12
SNF8-215ENST00000515572 MT-ND6P03923 174 aa8.04□□□□□ -1.12
SNF8-215ENST00000515572 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
SNF8-215ENST00000515572 KMT2AQ03164 3969 aa8.03□□□□□ -1.12
SNF8-215ENST00000515572 H7C423 109 aa8.03□□□□□ -1.12
SNF8-215ENST00000515572 TSHBP01222 138 aa8.03□□□□□ -1.12
SNF8-215ENST00000515572 MPV17L2Q567V2 206 aa8.03□□□□□ -1.12
SNF8-215ENST00000515572 Q8N3U1 123 aa8.03□□□□□ -1.12
SNF8-215ENST00000515572 TRAV8-3A0A0A6YYJ7 113 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 FCER1GP30273 86 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 GAGE6Q13070 117 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 DEFB104AQ8WTQ1 72 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 SMIM2Q9BVW6 85 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 MAP1LC3AQ9H492 121 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 SMCO4Q9NRQ5 59 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 KLK12Q9UKR0 248 aa8.02□□□□□ -1.13
SNF8-215ENST00000515572 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
SNF8-215ENST00000515572 ANGP03950 147 aaKnown RBP8.01□□□□□ -1.13
SNF8-215ENST00000515572 ESDP10768 282 aa8.01□□□□□ -1.13
SNF8-215ENST00000515572 RBX1P62877 108 aa8.01□□□□□ -1.13
SNF8-215ENST00000515572 PRSS29PA6NIE9 313 aa8□□□□□ -1.13
SNF8-215ENST00000515572 ZNF25P17030 456 aaPredicted RBP8□□□□□ -1.13
SNF8-215ENST00000515572 Q0VG73 95 aa8□□□□□ -1.13
SNF8-215ENST00000515572 Q6ZRN7 208 aaPredicted RBP8□□□□□ -1.13
SNF8-215ENST00000515572 Q8N976 141 aa8□□□□□ -1.13
SNF8-215ENST00000515572 RMI2Q96E14 147 aa8□□□□□ -1.13
SNF8-215ENST00000515572 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
SNF8-215ENST00000515572 Q9HAA7 133 aa8□□□□□ -1.13
SNF8-215ENST00000515572 CRPP02741 224 aa7.99□□□□□ -1.13
SNF8-215ENST00000515572 SMAGPQ0VAQ4 97 aa7.99□□□□□ -1.13
SNF8-215ENST00000515572 AMMECR1LQ6DCA0 310 aa7.99□□□□□ -1.13
SNF8-215ENST00000515572 YPEL4Q96NS1 127 aa7.99□□□□□ -1.13
SNF8-215ENST00000515572 TM2D2Q9BX73 214 aa7.99□□□□□ -1.13
SNF8-215ENST00000515572 COX11Q9Y6N1 276 aa7.99□□□□□ -1.13
SNF8-215ENST00000515572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.98□□□□□ -1.13
SNF8-215ENST00000515572 IGKV2-29A2NJV5 120 aaPredicted RBP7.98□□□□□ -1.13
SNF8-215ENST00000515572 K7EMI3 77 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 FGF6P10767 208 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 RAB5AP20339 215 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 FABP9Q0Z7S8 132 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 KIAA1644Q3SXP7 199 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 MRPL52Q86TS9 123 aaKnown RBP7.98□□□□□ -1.13
SNF8-215ENST00000515572 C20orf203Q8NBC4 194 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 UBE2WQ96B02 151 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 TMEM18Q96B42 140 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 PRR34Q9NV39 138 aa7.98□□□□□ -1.13
SNF8-215ENST00000515572 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 PSCAO43653 123 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 TNP2Q05952 138 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 MIAQ16674 131 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 RNASEKQ6P5S7 137 aaKnown RBP7.97□□□□□ -1.13
SNF8-215ENST00000515572 ENHOQ6UWT2 76 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 CBLN2Q8IUK8 224 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 Q8N8P6 123 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 TMEM101Q96IK0 257 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 ALKBH7Q9BT30 221 aaPredicted RBP7.97□□□□□ -1.13
SNF8-215ENST00000515572 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
SNF8-215ENST00000515572 CSDC2Q9Y534 153 aaKnown RBP7.97□□□□□ -1.13
SNF8-215ENST00000515572 TRAPPC1Q9Y5R8 145 aa7.97□□□□□ -1.13
SNF8-215ENST00000515572 LOC389332A0A1B0GUA5 103 aa7.96□□□□□ -1.14
SNF8-215ENST00000515572 REG3AQ06141 175 aa7.96□□□□□ -1.14
SNF8-215ENST00000515572 OR5A1Q8NGJ0 315 aa7.96□□□□□ -1.14
SNF8-215ENST00000515572 IGKV2D-24A0A075B6R9 120 aa7.95□□□□□ -1.14
SNF8-215ENST00000515572 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
SNF8-215ENST00000515572 DGAT2L7PQ6IED9 249 aa7.95□□□□□ -1.14
SNF8-215ENST00000515572 TIMM21Q9BVV7 248 aa7.95□□□□□ -1.14
SNF8-215ENST00000515572 C1orf43Q9BWL3 253 aa7.95□□□□□ -1.14
SNF8-215ENST00000515572 EREGO14944 169 aa7.94□□□□□ -1.14
SNF8-215ENST00000515572 G0S2P27469 103 aa7.94□□□□□ -1.14
SNF8-215ENST00000515572 IFI27P40305 119 aaPredicted RBP7.94□□□□□ -1.14
SNF8-215ENST00000515572 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
SNF8-215ENST00000515572 CLPSL2Q6UWE3 100 aa7.94□□□□□ -1.14
SNF8-215ENST00000515572 PRSS3P2Q8NHM4 247 aa7.94□□□□□ -1.14
SNF8-215ENST00000515572 ZNF664Q8N3J9 261 aa7.93□□□□□ -1.14
SNF8-215ENST00000515572 CDC42SE2Q9NRR3 84 aa7.93□□□□□ -1.14
SNF8-215ENST00000515572 SPANXA1Q9NS26 97 aa7.93□□□□□ -1.14
SNF8-215ENST00000515572 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms