RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
SMAD1-215ENST00000515385 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
SMAD1-215ENST00000515385 SIRPDQ9H106 197 aa9.37□□□□□ -0.91
SMAD1-215ENST00000515385 TECTAO75443 2155 aa9.37□□□□□ -0.91
SMAD1-215ENST00000515385 IGHV1OR15-1A0A075B7D0 117 aa9.36□□□□□ -0.91
SMAD1-215ENST00000515385 KLRB1Q12918 225 aa9.36□□□□□ -0.91
SMAD1-215ENST00000515385 LINC00336Q6ZUF6 198 aa9.36□□□□□ -0.91
SMAD1-215ENST00000515385 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
SMAD1-215ENST00000515385 ARHGAP32A7KAX9 2087 aa9.36□□□□□ -0.91
SMAD1-215ENST00000515385 H3BUA1 57 aa9.36□□□□□ -0.91
SMAD1-215ENST00000515385 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
SMAD1-215ENST00000515385 A8MZ25 164 aa9.35□□□□□ -0.91
SMAD1-215ENST00000515385 PRRC2AP48634 2157 aaKnown RBP9.35□□□□□ -0.91
SMAD1-215ENST00000515385 HIST2H2BCQ6DN03 193 aa9.35□□□□□ -0.91
SMAD1-215ENST00000515385 HIST2H2BDQ6DRA6 164 aa9.35□□□□□ -0.91
SMAD1-215ENST00000515385 DSPP15924 2871 aaKnown RBP9.34□□□□□ -0.91
SMAD1-215ENST00000515385 ZZEF1O43149 2961 aa9.34□□□□□ -0.91
SMAD1-215ENST00000515385 TRAV13-2A0A0B4J235 113 aa9.34□□□□□ -0.91
SMAD1-215ENST00000515385 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
SMAD1-215ENST00000515385 NDUFC2O95298 119 aa9.34□□□□□ -0.91
SMAD1-215ENST00000515385 CYSTM1Q9H1C7 97 aa9.34□□□□□ -0.91
SMAD1-215ENST00000515385 EDN2P20800 178 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
SMAD1-215ENST00000515385 SYNJ2BPP57105 145 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 MOB4Q9Y3A3 225 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 K7EMT4 169 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 Q8N2B8 174 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 CHCHD7Q9BUK0 85 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 Q9H8V8 135 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
SMAD1-215ENST00000515385 USP17L23D6RBM5 183 aa9.32□□□□□ -0.92
SMAD1-215ENST00000515385 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
SMAD1-215ENST00000515385 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
SMAD1-215ENST00000515385 TRBV12-3P01733 135 aa9.32□□□□□ -0.92
SMAD1-215ENST00000515385 SAA4P35542 130 aa9.32□□□□□ -0.92
SMAD1-215ENST00000515385 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
SMAD1-215ENST00000515385 FAM218AQ96MZ4 157 aa9.32□□□□□ -0.92
SMAD1-215ENST00000515385 TRAV12-2A0A075B6T6 113 aa9.31□□□□□ -0.92
SMAD1-215ENST00000515385 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
SMAD1-215ENST00000515385 C1orf195Q5TG92 126 aa9.31□□□□□ -0.92
SMAD1-215ENST00000515385 PIK3CD-AS1Q5SR53 167 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 S100A7L2Q5SY68 101 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 SOSTDC1Q6X4U4 206 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 H0YGX0 51 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 IGHG2P01859 326 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 ZFP36P26651 326 aaKnown RBP9.3□□□□□ -0.92
SMAD1-215ENST00000515385 SERP1Q9Y6X1 66 aa9.3□□□□□ -0.92
SMAD1-215ENST00000515385 BDP1A6H8Y1 2624 aa9.29□□□□□ -0.92
SMAD1-215ENST00000515385 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
SMAD1-215ENST00000515385 LY6HO94772 140 aa9.29□□□□□ -0.92
SMAD1-215ENST00000515385 ATP5EP2Q5VTU8 51 aa9.28□□□□□ -0.92
SMAD1-215ENST00000515385 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
SMAD1-215ENST00000515385 PKDREJQ9NTG1 2253 aa9.28□□□□□ -0.92
SMAD1-215ENST00000515385 SNRPD3P62318 126 aaKnown RBP9.28□□□□□ -0.92
SMAD1-215ENST00000515385 LINC01560Q8TB33 94 aa9.28□□□□□ -0.92
SMAD1-215ENST00000515385 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
SMAD1-215ENST00000515385 WNK2Q9Y3S1 2297 aa9.28□□□□□ -0.92
SMAD1-215ENST00000515385 ROS1P08922 2347 aa9.27□□□□□ -0.92
SMAD1-215ENST00000515385 CRPP02741 224 aa9.27□□□□□ -0.93
SMAD1-215ENST00000515385 C10orf105Q8TEF2 133 aa9.27□□□□□ -0.93
SMAD1-215ENST00000515385 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
SMAD1-215ENST00000515385 Q9HAA7 133 aa9.27□□□□□ -0.93
SMAD1-215ENST00000515385 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
SMAD1-215ENST00000515385 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
SMAD1-215ENST00000515385 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
SMAD1-215ENST00000515385 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.93
SMAD1-215ENST00000515385 CFAP47Q6ZTR5 3102 aa9.27□□□□□ -0.93
SMAD1-215ENST00000515385 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
SMAD1-215ENST00000515385 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
SMAD1-215ENST00000515385 C11orf71Q6IPW1 123 aa9.25□□□□□ -0.93
SMAD1-215ENST00000515385 C14orf132Q9NPU4 83 aa9.25□□□□□ -0.93
SMAD1-215ENST00000515385 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
SMAD1-215ENST00000515385 FBXL19-AS1Q494R0 122 aa9.25□□□□□ -0.93
SMAD1-215ENST00000515385 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
SMAD1-215ENST00000515385 PRRC2CQ9Y520 2896 aaKnown RBP9.25□□□□□ -0.93
SMAD1-215ENST00000515385 SMIM26A0A096LP01 95 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 IGHV3-11P01762 117 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 LINC00242Q5T6M2 205 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 A0A087WVE0 104 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 A0A0U1RRA0 63 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 BCE1O60756 84 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 COX6A2Q02221 97 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.24□□□□□ -0.93
SMAD1-215ENST00000515385 DEFB124Q8NES8 71 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
SMAD1-215ENST00000515385 ABCA4P78363 2273 aa9.23□□□□□ -0.93
SMAD1-215ENST00000515385 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 FHL2Q14192 279 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 POLEQ07864 2286 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 RBMY1BA6NDE4 496 aaKnown RBP9.22□□□□□ -0.93
SMAD1-215ENST00000515385 RBMY1EA6NEQ0 496 aaKnown RBP9.22□□□□□ -0.93
SMAD1-215ENST00000515385 K7EQG2 157 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 CCKP06307 115 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 RBMY1DP0C7P1 496 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms