RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-222	ENST00000514654	WFDC10A	Q9H1F0	79 aa		4.63	□□□□□ -1.67
ATP2C1-222	ENST00000514654	ATG2A	Q2TAZ0	1938 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	LY6G6D	O95868	133 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	PROK1	P58294	105 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	TMEM263	Q8WUH6	116 aa	Known RBP	4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	C11orf21	Q9P2W6	132 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	ICOS	Q9Y6W8	199 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	LGALS9	O00182	355 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	PRR9	Q5T870	116 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	C1orf43	Q9BWL3	253 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	LINC01006	Q8NI28	216 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	CARD19	Q96LW7	228 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	YPEL4	Q96NS1	127 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	KLK12	Q9UKR0	248 aa		4.62	□□□□□ -1.67
ATP2C1-222	ENST00000514654	IGHV4-4	A0A075B6R2	117 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	ANKRD17	O75179	2603 aa	Known RBP	4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	ZFAND6	Q6FIF0	208 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654		Q6ZUT4	128 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	TIMM17A	Q99595	171 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	HECTD1	Q9ULT8	2610 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	IGLL5	B9A064	214 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	PSMG3-AS1	Q96PY0	264 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	TINCR	A0A1B0GVN0	87 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	GAS8-AS1	O95177	125 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	SH2D6	Q7Z4S9	175 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	NTN5	Q8WTR8	489 aa	Predicted RBP	4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	OVOL2	Q9BRP0	275 aa		4.61	□□□□□ -1.67
ATP2C1-222	ENST00000514654	TRAV13-2	A0A0B4J235	113 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	TRAV12-1	A0A0B4J245	112 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654		F8WEM9	126 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	COX7A2L	O14548	114 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	FAM222A	Q5U5X8	452 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	CAMK2N2	Q96S95	79 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654		F8W1H4	67 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	BBC3	Q96PG8	261 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654		E9PLD3	99 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654		F8W735	103 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	NDUFA11	Q86Y39	141 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	COX7B2	Q8TF08	81 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	PPDPFL	Q8WWR9	84 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	SND1-IT1	Q9HBX3	110 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	PRO0255	Q9UI72	69 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	TRAV26-1	A0A087WT03	109 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	IGLV1-40	P01703	118 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	RNF185	Q96GF1	192 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	FAM110A	Q9BQ89	295 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	LAMA2	P24043	3122 aa	Known RBP	4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	PRUNE2	Q8WUY3	3088 aa		4.6	□□□□□ -1.67
ATP2C1-222	ENST00000514654	SOCS3	O14543	225 aa		4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	RS1	O15537	224 aa		4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	INSL3	P51460	131 aa		4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	CENPE	Q02224	2701 aa		4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	PLA2G2A	P14555	144 aa		4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	CCL18	P55774	89 aa		4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	RMI2	Q96E14	147 aa		4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	COL5A1	P20908	1838 aa	Predicted RBP	4.59	□□□□□ -1.67
ATP2C1-222	ENST00000514654	LINC00467	Q9BRT7	94 aa		4.59	□□□□□ -1.68
ATP2C1-222	ENST00000514654	CPAMD8	Q8IZJ3	1885 aa		4.59	□□□□□ -1.68
ATP2C1-222	ENST00000514654	RNASE3	P12724	160 aa	Known RBP	4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	RPL18A	Q02543	176 aa	Known RBP	4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	TMEM126A	Q9H061	195 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	PRSS47	A8MTI9	375 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	TAX1BP3	O14907	124 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	HERV-K104	P63124	156 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	DEFB105A	Q8NG35	78 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	EXPH5	Q8NEV8	1989 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	HAMP	P81172	84 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	ODF3	Q96PU9	254 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	TRBV10-1	A0A0K0K1A3	114 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654		M0QY20	66 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	UNC80	Q8N2C7	3258 aa		4.58	□□□□□ -1.68
ATP2C1-222	ENST00000514654	BAALC-AS2	P0C853	105 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	INAFM2	P0DMQ5	153 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	WFDC2	Q14508	124 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	CFAP126	Q5VTH2	177 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	SPATA12	Q7Z6I5	190 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	MIR7-3HG	Q8N6C7	128 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654		Q8N976	141 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	DCANP1	Q8TF63	244 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	IGKV2D-26	A0A0A0MRZ7	120 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	IGHV1-58	A0A0C4DH39	117 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	UBE2B	P63146	152 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	NEXN-AS1	Q8NBZ9	246 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	CDKN2A-AS1	Q9UH64	79 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	TEX48	A0A1B0GUV7	120 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	IFITM1	P13164	125 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	SPAG11B	Q08648	103 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	LINC00269	Q8N2A0	174 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	HIGD1B	Q9P298	99 aa		4.57	□□□□□ -1.68
ATP2C1-222	ENST00000514654	TNRC6B	Q9UPQ9	1833 aa	Known RBP	4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	MRPS12	O15235	138 aa	Known RBP	4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	HILS1	P60008	231 aa		4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	PRB2	P02812	416 aa	Predicted RBP	4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	IGLV4-3	A0A075B6K6	122 aa		4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	GAGE12H	A6NDE8	117 aa		4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	NCR3	O14931	201 aa		4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	HIGD2B	Q4VC39	106 aa		4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	NFE4	Q86UQ8	179 aa		4.56	□□□□□ -1.68
ATP2C1-222	ENST00000514654	MAPKAPK5-AS1	Q8N8E1	139 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms