RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
PFDN1-206ENST00000514611 K7EN84 100 aa8.55□□□□□ -1.04
PFDN1-206ENST00000514611 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
PFDN1-206ENST00000514611 RPL37AP61513 92 aaKnown RBP8.55□□□□□ -1.04
PFDN1-206ENST00000514611 SLC51BQ86UW2 128 aa8.55□□□□□ -1.04
PFDN1-206ENST00000514611 C9orf62Q8N4C0 152 aa8.55□□□□□ -1.04
PFDN1-206ENST00000514611 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
PFDN1-206ENST00000514611 A0A1B0GUV1 79 aa8.54□□□□□ -1.04
PFDN1-206ENST00000514611 hDV102S1A0JD36 115 aa8.54□□□□□ -1.04
PFDN1-206ENST00000514611 UBE2L6O14933 153 aa8.54□□□□□ -1.04
PFDN1-206ENST00000514611 AMTP48728 403 aa8.54□□□□□ -1.04
PFDN1-206ENST00000514611 TWIST1Q15672 202 aa8.54□□□□□ -1.04
PFDN1-206ENST00000514611 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
PFDN1-206ENST00000514611 RPP21Q9H633 154 aaKnown RBP8.54□□□□□ -1.04
PFDN1-206ENST00000514611 BIN3Q9NQY0 253 aa8.54□□□□□ -1.04
PFDN1-206ENST00000514611 TRAV8-4A0A0B4J246 113 aa8.53□□□□□ -1.04
PFDN1-206ENST00000514611 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
PFDN1-206ENST00000514611 COTL1Q14019 142 aa8.53□□□□□ -1.04
PFDN1-206ENST00000514611 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
PFDN1-206ENST00000514611 GATD1Q8NB37 220 aa8.53□□□□□ -1.04
PFDN1-206ENST00000514611 CLRN3Q8NCR9 226 aa8.53□□□□□ -1.04
PFDN1-206ENST00000514611 SLPIP03973 132 aa8.52□□□□□ -1.05
PFDN1-206ENST00000514611 FOXA3P55318 350 aaPredicted RBP8.52□□□□□ -1.05
PFDN1-206ENST00000514611 OCC1Q8TAD7 63 aa8.52□□□□□ -1.05
PFDN1-206ENST00000514611 GTSF1Q8WW33 167 aa8.52□□□□□ -1.05
PFDN1-206ENST00000514611 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
PFDN1-206ENST00000514611 IGKV3OR2-268A0A0C4DH90 116 aa8.51□□□□□ -1.05
PFDN1-206ENST00000514611 OXTP01178 125 aa8.51□□□□□ -1.05
PFDN1-206ENST00000514611 WDR73Q6P4I2 378 aa8.51□□□□□ -1.05
PFDN1-206ENST00000514611 Q6ZNX1 250 aa8.51□□□□□ -1.05
PFDN1-206ENST00000514611 CHTF8P0CG12 524 aa8.5□□□□□ -1.05
PFDN1-206ENST00000514611 TAGLN2P37802 199 aaKnown RBP8.5□□□□□ -1.05
PFDN1-206ENST00000514611 C15orf56Q8N910 161 aa8.5□□□□□ -1.05
PFDN1-206ENST00000514611 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.49□□□□□ -1.05
PFDN1-206ENST00000514611 IGKV2-29A2NJV5 120 aaPredicted RBP8.49□□□□□ -1.05
PFDN1-206ENST00000514611 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
PFDN1-206ENST00000514611 CIRBPQ14011 172 aaKnown RBP8.49□□□□□ -1.05
PFDN1-206ENST00000514611 AP5S1Q9NUS5 200 aa8.49□□□□□ -1.05
PFDN1-206ENST00000514611 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
PFDN1-206ENST00000514611 ALKAL2Q6UX46 152 aa8.48□□□□□ -1.05
PFDN1-206ENST00000514611 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
PFDN1-206ENST00000514611 GATCO43716 136 aaKnown RBP8.47□□□□□ -1.05
PFDN1-206ENST00000514611 APCSP02743 223 aa8.47□□□□□ -1.05
PFDN1-206ENST00000514611 CEBPGP53567 150 aa8.47□□□□□ -1.05
PFDN1-206ENST00000514611 HIGD2BQ4VC39 106 aa8.47□□□□□ -1.05
PFDN1-206ENST00000514611 SMIM15Q7Z3B0 74 aa8.47□□□□□ -1.05
PFDN1-206ENST00000514611 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
PFDN1-206ENST00000514611 A0A087WYN8 130 aa8.46□□□□□ -1.06
PFDN1-206ENST00000514611 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
PFDN1-206ENST00000514611 TMEM250H0YL14 139 aa8.46□□□□□ -1.06
PFDN1-206ENST00000514611 GAS8-AS1O95177 125 aa8.46□□□□□ -1.06
PFDN1-206ENST00000514611 SERTAD4-AS1Q5TG53 156 aa8.46□□□□□ -1.06
PFDN1-206ENST00000514611 AMMECR1LQ6DCA0 310 aa8.46□□□□□ -1.06
PFDN1-206ENST00000514611 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.06
PFDN1-206ENST00000514611 CHCHD10Q8WYQ3 142 aaPredicted RBP8.46□□□□□ -1.06
PFDN1-206ENST00000514611 TNXBP22105 4242 aa8.46□□□□□ -1.06
PFDN1-206ENST00000514611 hCG_2014768A0A024R1R8 64 aa8.45□□□□□ -1.06
PFDN1-206ENST00000514611 NCR2O95944 276 aa8.45□□□□□ -1.06
PFDN1-206ENST00000514611 FGF6P10767 208 aa8.45□□□□□ -1.06
PFDN1-206ENST00000514611 FAM231DQ6ZW35 169 aa8.45□□□□□ -1.06
PFDN1-206ENST00000514611 AKAP14Q86UN6 197 aa8.45□□□□□ -1.06
PFDN1-206ENST00000514611 COX6A2Q02221 97 aa8.44□□□□□ -1.06
PFDN1-206ENST00000514611 LYPD6BQ8NI32 183 aa8.44□□□□□ -1.06
PFDN1-206ENST00000514611 FAM231BA6NCW3 169 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 A8MWL6 223 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 I3L3M4 83 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 BLOC1S1P78537 153 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 CT83Q5H943 113 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 TEX261Q6UWH6 196 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 TMEM242Q9NWH2 141 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 UBR4Q5T4S7 5183 aa8.43□□□□□ -1.06
PFDN1-206ENST00000514611 GVQW2A0A096LPI5 108 aaPredicted RBP8.42□□□□□ -1.06
PFDN1-206ENST00000514611 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 H7C423 109 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 TSHBP01222 138 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 PMCHP20382 165 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 RPS10P46783 165 aaKnown RBP8.42□□□□□ -1.06
PFDN1-206ENST00000514611 FOXI1Q12951 378 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 LINC01551Q86U37 167 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 PRSS3P2Q8NHM4 247 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 RNF185Q96GF1 192 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 SMIM7Q9BQ49 75 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 PLAC8Q9NZF1 115 aa8.42□□□□□ -1.06
PFDN1-206ENST00000514611 PHOX2AO14813 284 aa8.41□□□□□ -1.06
PFDN1-206ENST00000514611 NDUFS6O75380 124 aaKnown RBP8.41□□□□□ -1.06
PFDN1-206ENST00000514611 ZNF25P17030 456 aaPredicted RBP8.41□□□□□ -1.06
PFDN1-206ENST00000514611 XCL1P47992 114 aa8.41□□□□□ -1.06
PFDN1-206ENST00000514611 OR5A1Q8NGJ0 315 aa8.41□□□□□ -1.06
PFDN1-206ENST00000514611 BORCS7Q96B45 105 aa8.41□□□□□ -1.06
PFDN1-206ENST00000514611 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
PFDN1-206ENST00000514611 ESDP10768 282 aa8.4□□□□□ -1.06
PFDN1-206ENST00000514611 MAJINQ3KP22 176 aa8.4□□□□□ -1.06
PFDN1-206ENST00000514611 AMN1Q8IY45 258 aa8.4□□□□□ -1.06
PFDN1-206ENST00000514611 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
PFDN1-206ENST00000514611 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms