RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 Q8N976 141 aa9.34□□□□□ -0.91
USP46-209ENST00000514536 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
USP46-209ENST00000514536 PSCAO43653 123 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 ANGP03950 147 aaKnown RBP9.33□□□□□ -0.92
USP46-209ENST00000514536 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 ATP5L2Q7Z4Y8 100 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 UBE2WQ96B02 151 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 I3L3M4 83 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 RBX1P62877 108 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 TMEM70Q9BUB7 260 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 CTDSP1Q9GZU7 261 aa9.33□□□□□ -0.92
USP46-209ENST00000514536 PPP1R17O96001 155 aa9.32□□□□□ -0.92
USP46-209ENST00000514536 CKS2P33552 79 aa9.32□□□□□ -0.92
USP46-209ENST00000514536 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
USP46-209ENST00000514536 NRACQ8N912 160 aa9.32□□□□□ -0.92
USP46-209ENST00000514536 TM2D2Q9BX73 214 aa9.32□□□□□ -0.92
USP46-209ENST00000514536 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
USP46-209ENST00000514536 A0A087WTM6 91 aa9.31□□□□□ -0.92
USP46-209ENST00000514536 UBE2L6O14933 153 aa9.31□□□□□ -0.92
USP46-209ENST00000514536 ENHOQ6UWT2 76 aa9.31□□□□□ -0.92
USP46-209ENST00000514536 SPATA12Q7Z6I5 190 aa9.31□□□□□ -0.92
USP46-209ENST00000514536 BTF3L4Q96K17 158 aa9.31□□□□□ -0.92
USP46-209ENST00000514536 IMMP2LQ96T52 175 aa9.31□□□□□ -0.92
USP46-209ENST00000514536 CARHSP1Q9Y2V2 147 aaKnown RBP9.31□□□□□ -0.92
USP46-209ENST00000514536 EREGO14944 169 aa9.3□□□□□ -0.92
USP46-209ENST00000514536 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
USP46-209ENST00000514536 IGKV2D-24A0A075B6R9 120 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 C7orf77A4D0Y5 90 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 D6R8Y8 96 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 VCYO14598 125 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 TSHBP01222 138 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 APCSP02743 223 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 SUMO2P61956 95 aaKnown RBP9.29□□□□□ -0.92
USP46-209ENST00000514536 Q0VG73 95 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 RMI2Q96E14 147 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 IGLV4-60A0A075B6I1 120 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.29□□□□□ -0.92
USP46-209ENST00000514536 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 IGKV2-29A2NJV5 120 aaPredicted RBP9.29□□□□□ -0.92
USP46-209ENST00000514536 LRCOL1A6NCL2 159 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 CRPP02741 224 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 LINC00269Q8N2A0 174 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 C20orf203Q8NBC4 194 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 CLRN3Q8NCR9 226 aa9.29□□□□□ -0.92
USP46-209ENST00000514536 TRBV24-1A0A075B6N3 115 aa9.28□□□□□ -0.92
USP46-209ENST00000514536 TNFRSF6BO95407 300 aa9.28□□□□□ -0.92
USP46-209ENST00000514536 CLPSL2Q6UWE3 100 aa9.28□□□□□ -0.92
USP46-209ENST00000514536 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
USP46-209ENST00000514536 RPS10P5Q9NQ39 176 aa9.28□□□□□ -0.92
USP46-209ENST00000514536 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
USP46-209ENST00000514536 PKHD1P08F94 4074 aa9.27□□□□□ -0.93
USP46-209ENST00000514536 NPYP01303 97 aa9.27□□□□□ -0.93
USP46-209ENST00000514536 PPBPP02775 128 aa9.27□□□□□ -0.93
USP46-209ENST00000514536 FUSP35637 526 aaKnown RBP eCLIP9.27□□□□□ -0.93
USP46-209ENST00000514536 TMEM136Q6ZRR5 245 aa9.27□□□□□ -0.93
USP46-209ENST00000514536 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
USP46-209ENST00000514536 PRR34Q9NV39 138 aa9.27□□□□□ -0.93
USP46-209ENST00000514536 PCLOQ9Y6V0 5065 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 APOC3P02656 99 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 ESDP10768 282 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 S100PP25815 95 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 FCER1GP30273 86 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 RHEBQ15382 184 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 RNASEKQ6P5S7 137 aaKnown RBP9.26□□□□□ -0.93
USP46-209ENST00000514536 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
USP46-209ENST00000514536 H7C423 109 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 FGF6P10767 208 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 REG3AQ06141 175 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 MIAQ16674 131 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 BAALCQ8WXS3 180 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 KIR2DL4Q99706 377 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 PKD1P98161 4303 aa9.25□□□□□ -0.93
USP46-209ENST00000514536 TRAV9-1A0A075B6T8 112 aa9.24□□□□□ -0.93
USP46-209ENST00000514536 PHOX2AO14813 284 aa9.24□□□□□ -0.93
USP46-209ENST00000514536 LECT2O14960 151 aa9.24□□□□□ -0.93
USP46-209ENST00000514536 WFDC2Q14508 124 aa9.24□□□□□ -0.93
USP46-209ENST00000514536 RPL32P62910 135 aaKnown RBP9.24□□□□□ -0.93
USP46-209ENST00000514536 NDUFA5Q16718 116 aa9.24□□□□□ -0.93
USP46-209ENST00000514536 DYNC1H1Q14204 4646 aaKnown RBP9.23□□□□□ -0.93
USP46-209ENST00000514536 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
USP46-209ENST00000514536 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
USP46-209ENST00000514536 SNAPINO95295 136 aa9.22□□□□□ -0.93
USP46-209ENST00000514536 SLC7A5P1Q8MH63 180 aa9.22□□□□□ -0.93
USP46-209ENST00000514536 SVBPQ8N300 66 aa9.22□□□□□ -0.93
USP46-209ENST00000514536 Q8N814 137 aa9.22□□□□□ -0.93
USP46-209ENST00000514536 TMEM101Q96IK0 257 aa9.22□□□□□ -0.93
USP46-209ENST00000514536 IGKV3OR2-268A0A0C4DH90 116 aa9.21□□□□□ -0.93
USP46-209ENST00000514536 TCAPO15273 167 aa9.21□□□□□ -0.93
USP46-209ENST00000514536 ZNF25P17030 456 aaPredicted RBP9.21□□□□□ -0.93
USP46-209ENST00000514536 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.93
USP46-209ENST00000514536 DNAH11Q96DT5 4516 aa9.21□□□□□ -0.94
USP46-209ENST00000514536 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
USP46-209ENST00000514536 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms