RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TRBV7-7A0A0K0K1E9 115 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 H7C1H1 209 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 IGKV2D-40P01614 121 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-205ENST00000514271 PSMB8P28062 276 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 TWIST1Q15672 202 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 C1orf195Q5TG92 126 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 FAM19A3Q7Z5A8 133 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 NOTCH2Q04721 2471 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 NSD1Q96L73 2696 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-205ENST00000514271 A0A0B4J2C4 111 aa5.46□□□□□ -1.53
CLIP1-205ENST00000514271 C11orf86A6NJI1 115 aa5.46□□□□□ -1.53
CLIP1-205ENST00000514271 ATP6V0E1O15342 81 aa5.46□□□□□ -1.53
CLIP1-205ENST00000514271 PRB3Q04118 309 aaPredicted RBP5.46□□□□□ -1.53
CLIP1-205ENST00000514271 ZNF876PQ49A33 203 aa5.46□□□□□ -1.53
CLIP1-205ENST00000514271 SMIM2Q9BVW6 85 aa5.46□□□□□ -1.53
CLIP1-205ENST00000514271 FN1P02751 2386 aaKnown RBP5.46□□□□□ -1.54
CLIP1-205ENST00000514271 TRBV7-1A0A0A6YYK4 115 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 BLCAPP62952 87 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 SYT8Q8NBV8 401 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 TP53TG1Q9Y2A0 90 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 FAM240AA0A1B0GVK7 77 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 CCL24O00175 119 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 Q6ZS46 218 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 SLC50A1Q9BRV3 221 aa5.46□□□□□ -1.54
CLIP1-205ENST00000514271 NHP2Q9NX24 153 aaKnown RBP5.46□□□□□ -1.54
CLIP1-205ENST00000514271 SPINK8P0C7L1 97 aa5.45□□□□□ -1.54
CLIP1-205ENST00000514271 RNASE3P12724 160 aaKnown RBP5.45□□□□□ -1.54
CLIP1-205ENST00000514271 HLA-DMBP28068 263 aa5.45□□□□□ -1.54
CLIP1-205ENST00000514271 AMTNQ6UX39 209 aa5.45□□□□□ -1.54
CLIP1-205ENST00000514271 MAST4O15021 2626 aa5.45□□□□□ -1.54
CLIP1-205ENST00000514271 VCYO14598 125 aa5.45□□□□□ -1.54
CLIP1-205ENST00000514271 PPDPFLQ8WWR9 84 aa5.45□□□□□ -1.54
CLIP1-205ENST00000514271 EEF1AKMT3Q96AZ1 226 aa5.45□□□□□ -1.54
CLIP1-205ENST00000514271 M0R2P5 195 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 ZNF256Q9Y2P7 627 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-205ENST00000514271 CKS2P33552 79 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 NMUP48645 174 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 EMP1P54849 157 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 LINC01587Q99440 93 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 TRBV27A0A0K0K1C4 114 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 LOC389332A0A1B0GUA5 103 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 A8MTW9 85 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 CCDC179H3BU77 68 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 ASIPP42127 132 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 TIMM17AQ99595 171 aa5.44□□□□□ -1.54
CLIP1-205ENST00000514271 TRBV20-1A0A075B6N2 111 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 IGHV3-33P01772 117 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 LYZP61626 148 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 TMEM101Q96IK0 257 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 KLLNB2CW77 178 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 ECSCRQ19T08 205 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 C10orf126Q8N4M7 172 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 J3KT08 172 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 LGALS9O00182 355 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 NSUN5P1Q3KNT7 163 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 WFDC9Q8NEX5 89 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 Q8TAT8 98 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 C11orf45Q8TAV5 145 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 SELENOKQ9Y6D0 94 aa5.43□□□□□ -1.54
CLIP1-205ENST00000514271 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 ZNF688P0C7X2 276 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 RNASE4P34096 147 aaKnown RBP5.42□□□□□ -1.54
CLIP1-205ENST00000514271 IL4P05112 153 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 CD164Q04900 197 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 Q8N1Y9 231 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 ANKRD29Q8N6D5 301 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 APOMO95445 188 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 PRR26Q8N8Z3 221 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 MDFIQ99750 246 aa5.42□□□□□ -1.54
CLIP1-205ENST00000514271 SDHAF1A6NFY7 115 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 CD28P10747 220 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 C9orf66Q5T8R8 295 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 C9orf85Q96MD7 179 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 AP1S3Q96PC3 154 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 PRADC1Q9BSG0 188 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 LOC107984640A0A0U1RRK4 108 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 FAM236DA0A1B0GTK5 79 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 FAM236CP0DP71 79 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 CMC4P56277 68 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-205ENST00000514271 OBSCN-AS1Q96MR7 158 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 SPANXDQ9BXN6 97 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 ACANP16112 2415 aa5.41□□□□□ -1.54
CLIP1-205ENST00000514271 CUBNO60494 3623 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 TRAV26-2A0A0B4J265 109 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 ADARB2-AS1A8MUL3 147 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 K7EMT4 169 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 ZNF22P17026 224 aaPredicted RBP5.4□□□□□ -1.54
CLIP1-205ENST00000514271 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.54
CLIP1-205ENST00000514271 C14orf178Q8N769 122 aaPredicted RBP5.4□□□□□ -1.54
CLIP1-205ENST00000514271 KLHL30-AS1Q8NEE0 82 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 DCANP1Q8TF63 244 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 IGLV5-45A0A087WSX0 123 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 LINC01549A6NIU2 74 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 EPM2AB3EWF7 344 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 ORMDL2Q53FV1 153 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
CLIP1-205ENST00000514271 KIR2DL4Q99706 377 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms