RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 TIRAPP58753 221 aa8.18□□□□□ -1.1
SMAD1-212ENST00000514168 TMEM97Q5BJF2 176 aa8.18□□□□□ -1.1
SMAD1-212ENST00000514168 LOC105371267A0A1B0GV96 52 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 I3L3M4 83 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 VCYO14598 125 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 PMCHP20382 165 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
SMAD1-212ENST00000514168 TMEM70Q9BUB7 260 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 MAP1LC3AQ9H492 121 aa8.17□□□□□ -1.1
SMAD1-212ENST00000514168 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
SMAD1-212ENST00000514168 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
SMAD1-212ENST00000514168 COTL1Q14019 142 aa8.16□□□□□ -1.1
SMAD1-212ENST00000514168 LELP1Q5T871 98 aa8.16□□□□□ -1.1
SMAD1-212ENST00000514168 SMIM2Q9BVW6 85 aa8.16□□□□□ -1.1
SMAD1-212ENST00000514168 LINC00588Q9Y4M8 146 aa8.16□□□□□ -1.1
SMAD1-212ENST00000514168 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
SMAD1-212ENST00000514168 TRGC2P03986 189 aa8.15□□□□□ -1.1
SMAD1-212ENST00000514168 KIR2DL4Q99706 377 aa8.15□□□□□ -1.1
SMAD1-212ENST00000514168 MRPS16Q9Y3D3 137 aaKnown RBP8.15□□□□□ -1.1
SMAD1-212ENST00000514168 TRBV25-1A0A075B6N4 114 aa8.14□□□□□ -1.11
SMAD1-212ENST00000514168 TRAV8-6A0A0B4J262 113 aa8.14□□□□□ -1.11
SMAD1-212ENST00000514168 LOC389332A0A1B0GUA5 103 aa8.14□□□□□ -1.11
SMAD1-212ENST00000514168 NTM-AS1Q6ZSK4 140 aa8.14□□□□□ -1.11
SMAD1-212ENST00000514168 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
SMAD1-212ENST00000514168 IGHV1-24A0A0C4DH33 117 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 TCAPO15273 167 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 TSHBP01222 138 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 FCER1GP30273 86 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 AMTP48728 403 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 IQCJQ1A5X6 159 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 Q8N8P6 123 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 UPK3BQ9BT76 320 aa8.13□□□□□ -1.11
SMAD1-212ENST00000514168 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
SMAD1-212ENST00000514168 IGLV2-18A0A075B6J9 118 aa8.12□□□□□ -1.11
SMAD1-212ENST00000514168 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
SMAD1-212ENST00000514168 TMEM243Q9BU79 118 aa8.12□□□□□ -1.11
SMAD1-212ENST00000514168 HSPG2P98160 4391 aa8.11□□□□□ -1.11
SMAD1-212ENST00000514168 K7EMI3 77 aa8.11□□□□□ -1.11
SMAD1-212ENST00000514168 RTL8CO15255 209 aa8.11□□□□□ -1.11
SMAD1-212ENST00000514168 IFI27P40305 119 aaPredicted RBP8.11□□□□□ -1.11
SMAD1-212ENST00000514168 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
SMAD1-212ENST00000514168 WFDC10BQ8IUB3 73 aa8.11□□□□□ -1.11
SMAD1-212ENST00000514168 CHCHD5Q9BSY4 110 aa8.11□□□□□ -1.11
SMAD1-212ENST00000514168 SIVA1O15304 175 aa8.1□□□□□ -1.11
SMAD1-212ENST00000514168 ESDP10768 282 aa8.1□□□□□ -1.11
SMAD1-212ENST00000514168 PKIAP61925 76 aa8.1□□□□□ -1.11
SMAD1-212ENST00000514168 CHCHD7Q9BUK0 85 aa8.1□□□□□ -1.11
SMAD1-212ENST00000514168 Q9H8V8 135 aa8.1□□□□□ -1.11
SMAD1-212ENST00000514168 UBE2L6O14933 153 aa8.09□□□□□ -1.11
SMAD1-212ENST00000514168 RAB5BP61020 215 aa8.09□□□□□ -1.11
SMAD1-212ENST00000514168 ORMDL2Q53FV1 153 aa8.09□□□□□ -1.11
SMAD1-212ENST00000514168 FA2HQ7L5A8 372 aa8.09□□□□□ -1.11
SMAD1-212ENST00000514168 NIT1Q86X76 327 aa8.09□□□□□ -1.11
SMAD1-212ENST00000514168 TMEM18Q96B42 140 aa8.09□□□□□ -1.11
SMAD1-212ENST00000514168 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
SMAD1-212ENST00000514168 H7C423 109 aa8.08□□□□□ -1.12
SMAD1-212ENST00000514168 LINC00614P0C842 121 aa8.08□□□□□ -1.12
SMAD1-212ENST00000514168 Q0VG73 95 aa8.08□□□□□ -1.12
SMAD1-212ENST00000514168 GAGE6Q13070 117 aa8.08□□□□□ -1.12
SMAD1-212ENST00000514168 LAGE3Q14657 143 aa8.08□□□□□ -1.12
SMAD1-212ENST00000514168 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-212ENST00000514168 A0A087WX48 190 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-212ENST00000514168 LINC01546A6NGU7 62 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 C1orf196B1AJZ1 125 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 G0S2P27469 103 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 LINC01556Q5JQF7 62 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 C20orf203Q8NBC4 194 aa8.07□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BKO60814 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 IGHV3-30P01768 117 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 IGHV3-33P01772 117 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BJP06899 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 IGHV3-30-5P0DP03 117 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BOP23527 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BBP33778 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BDP58876 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BCP62807 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 SMAGPQ0VAQ4 97 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST2H2BEQ16778 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.06□□□□□ -1.12
SMAD1-212ENST00000514168 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BHQ93079 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 URB1-AS1Q96HZ7 61 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BNQ99877 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 HIST1H2BMQ99879 126 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
SMAD1-212ENST00000514168 TRAV9-2A0A087WT02 112 aa8.05□□□□□ -1.12
SMAD1-212ENST00000514168 A0A1B0GUV1 79 aa8.05□□□□□ -1.12
SMAD1-212ENST00000514168 PRSS29PA6NIE9 313 aa8.05□□□□□ -1.12
SMAD1-212ENST00000514168 K7EP13 123 aa8.05□□□□□ -1.12
SMAD1-212ENST00000514168 FGF6P10767 208 aa8.05□□□□□ -1.12
SMAD1-212ENST00000514168 MPV17L2Q567V2 206 aa8.05□□□□□ -1.12
SMAD1-212ENST00000514168 RNASEKQ6P5S7 137 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms