RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 EP400Q96L91 3159 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 IGKV2-40A0A087WW87 121 aaPredicted RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 TRBV10-1A0A0K0K1A3 114 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 F6UB75 175 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 SMKR1H3BMG3 65 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 H7C2G1 150 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 IGKV2D-40P01614 121 aaPredicted RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 CCKP06307 115 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 CTSGP08311 255 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 CD28P10747 220 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 CD24P25063 80 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 COX17Q14061 63 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 Q6ZVQ6 151 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 FAM19A3Q7Z5A8 133 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 DAZ4Q86SG3 579 aaKnown RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 DYNAPQ8N1N2 210 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 C14orf178Q8N769 122 aaPredicted RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 DEFB108BQ8NET1 73 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 CCL17Q92583 94 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 C2orf48Q96LS8 159 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 FAM218AQ96MZ4 157 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 AMELXQ99217 191 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 RPP25Q9BUL9 199 aaKnown RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 DEFB127Q9H1M4 99 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 DAZ3Q9NR90 486 aaKnown RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 KLK5Q9Y337 293 aaPredicted RBP2.37□□□□□ -2.03
PROM1-216ENST00000513946 SRCAPQ6ZRS2 3230 aa2.37□□□□□ -2.03
PROM1-216ENST00000513946 SPTBP11277 2137 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 ALPK2Q86TB3 2170 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 TNRC6BQ9UPQ9 1833 aaKnown RBP2.36□□□□□ -2.03
PROM1-216ENST00000513946 SPAG17Q6Q759 2223 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 IGLV4-69A0A075B6H9 119 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 IBA57-AS1B1ANH7 110 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 LY6LH3BQJ8 138 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 PFN2P35080 140 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 UBE2E1P51965 193 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 EFNA4P52798 201 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 ATP5J2P56134 94 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 SEC61GP60059 68 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 BLCAPP62952 87 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 C15orf32Q32M92 178 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 GPHB5Q86YW7 130 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 C1orf158Q8N1D5 194 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 KLHL30-AS1Q8NEE0 82 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 RNASE6Q93091 150 aaKnown RBP2.36□□□□□ -2.03
PROM1-216ENST00000513946 LEAP2Q969E1 77 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 DSCR8Q96T75 97 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 SELENOKQ9Y6D0 94 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 MPDZO75970 2070 aa2.36□□□□□ -2.03
PROM1-216ENST00000513946 TRBV7-6A0A0J9YX20 115 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 KLLNB2CW77 178 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 LOXP28300 417 aaPredicted RBP2.35□□□□□ -2.03
PROM1-216ENST00000513946 C1orf195Q5TG92 126 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 LYPD5Q6UWN5 251 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 Q6ZQT7 251 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.35□□□□□ -2.03
PROM1-216ENST00000513946 LINC00308Q8TCZ7 52 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 OBSCN-AS1Q96MR7 158 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 LINC00467Q9BRT7 94 aa2.35□□□□□ -2.03
PROM1-216ENST00000513946 NCKAP5O14513 1909 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 GON4LQ3T8J9 2241 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 EML5Q05BV3 1969 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 TANC2Q9HCD6 1990 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 IGLV4-3A0A075B6K6 122 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 IGHV1OR15-1A0A075B7D0 117 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 PINLYPA6NC86 204 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 E7EUB6 86 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 H3BTX0 84 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 M0QY20 66 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 UBE2L6O14933 153 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 RBM3P98179 157 aaKnown RBP2.34□□□□□ -2.03
PROM1-216ENST00000513946 DEFB114Q30KQ6 69 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 C10orf55Q5SWW7 151 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 ITLN2Q8WWU7 325 aaPredicted RBP2.34□□□□□ -2.03
PROM1-216ENST00000513946 FAM19A4Q96LR4 140 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 SPRR3Q9UBC9 169 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 CTSZQ9UBR2 303 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 UBE2D4Q9Y2X8 147 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 U3KQA8 63 aa2.34□□□□□ -2.03
PROM1-216ENST00000513946 NOTCH2Q04721 2471 aa2.34□□□□□ -2.04
PROM1-216ENST00000513946 NCOA6Q14686 2063 aaPredicted RBP2.33□□□□□ -2.04
PROM1-216ENST00000513946 C2orf16Q68DN1 1984 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 LOC110117498A0A087WWA1 95 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 ODF3BA8MYP8 253 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 IGHV3-48P01763 117 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 TRGV3P03979 118 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 IGF1P05019 195 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 XCL1P47992 114 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 FXYD7P58549 80 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 DAD1P61803 113 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 CD164Q04900 197 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 VMO1Q7Z5L0 202 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 PRR15Q8IV56 129 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 DEFB119Q8N690 84 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 ZFAND2AQ8N6M9 145 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms