RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 TMEM97Q5BJF2 176 aa7.03□□□□□ -1.28
TPM3-221ENST00000513769 RPL36ALQ969Q0 106 aaKnown RBP7.03□□□□□ -1.28
TPM3-221ENST00000513769 TMEM141Q96I45 108 aa7.03□□□□□ -1.28
TPM3-221ENST00000513769 ZNF479Q96JC4 524 aa7.03□□□□□ -1.28
TPM3-221ENST00000513769 ZMAT4Q9H898 229 aa7.03□□□□□ -1.28
TPM3-221ENST00000513769 NOTCH3Q9UM47 2321 aa7.02□□□□□ -1.28
TPM3-221ENST00000513769 GAGE12BA1L429 117 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 G3V4G9 280 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.02□□□□□ -1.29
TPM3-221ENST00000513769 GAGE7O76087 117 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 GAGE12FP0CL80 117 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 GAGE12GP0CL81 117 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 GAGE12IP0CL82 117 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 SMAGPQ0VAQ4 97 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 FHL2Q14192 279 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 DEFB135Q30KP9 77 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 PAPPA-AS1Q5QFB9 102 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 Q6ZSN1 163 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 NEXN-AS1Q8NBZ9 246 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 PRADC1Q9BSG0 188 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 GTSF1LQ9H1H1 148 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 DKK2Q9UBU2 259 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 HHLA3Q9XRX5 114 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
TPM3-221ENST00000513769 TRAV12-1A0A0B4J245 112 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 TRGV4A0A0C4DH28 118 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 LINC01545Q5VT33 79 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 CFAP161Q6P656 301 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 TEX43Q6ZNM6 134 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 SLC25A29Q8N8R3 303 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 Q8NAQ8 132 aa7.01□□□□□ -1.29
TPM3-221ENST00000513769 VWFP04275 2813 aa7□□□□□ -1.29
TPM3-221ENST00000513769 IGHV3-73A0A0B4J1V6 119 aa7□□□□□ -1.29
TPM3-221ENST00000513769 H7C423 109 aa7□□□□□ -1.29
TPM3-221ENST00000513769 K7EQD1 137 aa7□□□□□ -1.29
TPM3-221ENST00000513769 PRSS1P07477 247 aa7□□□□□ -1.29
TPM3-221ENST00000513769 C20orf203Q8NBC4 194 aa7□□□□□ -1.29
TPM3-221ENST00000513769 ZNRF2Q8NHG8 242 aa7□□□□□ -1.29
TPM3-221ENST00000513769 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
TPM3-221ENST00000513769 TIMM17AQ99595 171 aa7□□□□□ -1.29
TPM3-221ENST00000513769 PRO0255Q9UI72 69 aa7□□□□□ -1.29
TPM3-221ENST00000513769 IGHV4-28A0A0C4DH34 117 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 IGIPA6NJ69 53 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 TSHBP01222 138 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 P0DMU3 169 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 FAM231AP0DMU4 169 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 FAM231CP0DMU5 169 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 EMP1P54849 157 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 UBE2D3P61077 147 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 UBE2D2P62837 147 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 COTL1Q14019 142 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 FAM222AQ5U5X8 452 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 Q6ZN92 141 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 SH2D6Q7Z4S9 175 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 Q8N976 141 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 TIMM21Q9BVV7 248 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 PLA2G2DQ9UNK4 145 aa6.99□□□□□ -1.29
TPM3-221ENST00000513769 CSDC2Q9Y534 153 aaKnown RBP6.99□□□□□ -1.29
TPM3-221ENST00000513769 TRRAPQ9Y4A5 3859 aa6.98□□□□□ -1.29
TPM3-221ENST00000513769 TRAV9-2A0A087WT02 112 aa6.98□□□□□ -1.29
TPM3-221ENST00000513769 ATP5G1P05496 136 aa6.98□□□□□ -1.29
TPM3-221ENST00000513769 DEFB130BP0DP73 79 aa6.98□□□□□ -1.29
TPM3-221ENST00000513769 DEFB130AP0DP74 79 aa6.98□□□□□ -1.29
TPM3-221ENST00000513769 DAD1P61803 113 aa6.98□□□□□ -1.29
TPM3-221ENST00000513769 PKIAP61925 76 aa6.98□□□□□ -1.29
TPM3-221ENST00000513769 C11orf68Q9H3H3 251 aaKnown RBP6.98□□□□□ -1.29
TPM3-221ENST00000513769 A0A087WX48 190 aa6.97□□□□□ -1.29
TPM3-221ENST00000513769 HSBP1L1C9JCN9 74 aa6.97□□□□□ -1.29
TPM3-221ENST00000513769 H3BNG1 76 aa6.97□□□□□ -1.29
TPM3-221ENST00000513769 LINC00173Q6ZV60 143 aa6.97□□□□□ -1.29
TPM3-221ENST00000513769 NACAE9PAV3 2078 aa6.96□□□□□ -1.29
TPM3-221ENST00000513769 NOTCH1P46531 2555 aa6.96□□□□□ -1.29
TPM3-221ENST00000513769 TSTD3H0UI37 97 aa6.96□□□□□ -1.3
TPM3-221ENST00000513769 PMVKQ15126 192 aa6.96□□□□□ -1.3
TPM3-221ENST00000513769 ZNF664Q8N3J9 261 aa6.96□□□□□ -1.3
TPM3-221ENST00000513769 SPATA25Q9BR10 227 aa6.96□□□□□ -1.3
TPM3-221ENST00000513769 VAMP8Q9BV40 100 aa6.96□□□□□ -1.3
TPM3-221ENST00000513769 SPANXA1Q9NS26 97 aa6.96□□□□□ -1.3
TPM3-221ENST00000513769 TRAV26-1A0A087WT03 109 aa6.95□□□□□ -1.3
TPM3-221ENST00000513769 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
TPM3-221ENST00000513769 PLNP26678 52 aa6.95□□□□□ -1.3
TPM3-221ENST00000513769 MRPS36P82909 103 aaKnown RBP6.95□□□□□ -1.3
TPM3-221ENST00000513769 DEFB121Q5J5C9 76 aa6.95□□□□□ -1.3
TPM3-221ENST00000513769 TM2D3Q9BRN9 247 aa6.95□□□□□ -1.3
TPM3-221ENST00000513769 F8VRH5 84 aa6.94□□□□□ -1.3
TPM3-221ENST00000513769 ODF1Q14990 250 aa6.94□□□□□ -1.3
TPM3-221ENST00000513769 MRPL52Q86TS9 123 aaKnown RBP6.94□□□□□ -1.3
TPM3-221ENST00000513769 CHCHD7Q9BUK0 85 aa6.94□□□□□ -1.3
TPM3-221ENST00000513769 VCX2Q9H322 139 aa6.94□□□□□ -1.3
TPM3-221ENST00000513769 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
TPM3-221ENST00000513769 Q9UF83 564 aa6.94□□□□□ -1.3
TPM3-221ENST00000513769 PRSS29PA6NIE9 313 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 K7EIL1 84 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 DPM2O94777 84 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 IGKCP01834 107 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 LINC00694P0DN24 101 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms