RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 APCSP02743 223 aa6.42□□□□□ -1.38
PDGFC-209ENST00000513664 AMTP48728 403 aa6.42□□□□□ -1.38
PDGFC-209ENST00000513664 SUMO2P61956 95 aaKnown RBP6.42□□□□□ -1.38
PDGFC-209ENST00000513664 RPL32P62910 135 aaKnown RBP6.42□□□□□ -1.38
PDGFC-209ENST00000513664 NRACQ8N912 160 aa6.42□□□□□ -1.38
PDGFC-209ENST00000513664 KIR2DL4Q99706 377 aa6.42□□□□□ -1.38
PDGFC-209ENST00000513664 KRTAP1-5Q9BYS1 174 aa6.42□□□□□ -1.38
PDGFC-209ENST00000513664 D6R8Y8 96 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 TNFRSF6BO95407 300 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 IGHV3-30P01768 117 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 IGHV3-33P01772 117 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 HLA-DQA1P01909 254 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 MT-ND6P03923 174 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 IGHV3-30-3P0DP02 117 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 IGHV3-30-5P0DP03 117 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
PDGFC-209ENST00000513664 POLR2KP53803 58 aaKnown RBP6.41□□□□□ -1.38
PDGFC-209ENST00000513664 SMAGPQ0VAQ4 97 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 TMEM136Q6ZRR5 245 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 GNB1LQ9BYB4 327 aa6.41□□□□□ -1.38
PDGFC-209ENST00000513664 A0A1B0GUV1 79 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 SMKR1H3BMG3 65 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 RTL8CO15255 209 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 GAS8-AS1O95177 125 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 FCER1GP30273 86 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 Q0VG73 95 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 SLC7A5P1Q8MH63 180 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 RMI2Q96E14 147 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 PRELID3AQ96N28 172 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 COX11Q9Y6N1 276 aa6.4□□□□□ -1.38
PDGFC-209ENST00000513664 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.39
PDGFC-209ENST00000513664 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
PDGFC-209ENST00000513664 CRPP02741 224 aa6.39□□□□□ -1.39
PDGFC-209ENST00000513664 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
PDGFC-209ENST00000513664 ZNF25P17030 456 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-209ENST00000513664 RBX1P62877 108 aa6.39□□□□□ -1.39
PDGFC-209ENST00000513664 GAGE6Q13070 117 aa6.39□□□□□ -1.39
PDGFC-209ENST00000513664 MPV17L2Q567V2 206 aa6.39□□□□□ -1.39
PDGFC-209ENST00000513664 ATRAIDQ6UW56 229 aa6.39□□□□□ -1.39
PDGFC-209ENST00000513664 PRSS47A8MTI9 375 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 PSCAO43653 123 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 TSHBP01222 138 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 AMMECR1LQ6DCA0 310 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 TMEM18Q96B42 140 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 MAP1LC3AQ9H492 121 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 KLK12Q9UKR0 248 aa6.38□□□□□ -1.39
PDGFC-209ENST00000513664 K7EMI3 77 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 EREGO14944 169 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 NPYP01303 97 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 ESDP10768 282 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 RAB5AP20339 215 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 MIAQ16674 131 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
PDGFC-209ENST00000513664 Q8N3U1 123 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 Q8N976 141 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 UBE2WQ96B02 151 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 TMEM101Q96IK0 257 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 Q9HAA7 133 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 SMCO4Q9NRQ5 59 aa6.37□□□□□ -1.39
PDGFC-209ENST00000513664 G0S2P27469 103 aa6.36□□□□□ -1.39
PDGFC-209ENST00000513664 NXT2Q9NPJ8 142 aaKnown RBP6.36□□□□□ -1.39
PDGFC-209ENST00000513664 PRR34Q9NV39 138 aa6.36□□□□□ -1.39
PDGFC-209ENST00000513664 HECTD4Q9Y4D8 3996 aa6.36□□□□□ -1.39
PDGFC-209ENST00000513664 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.35□□□□□ -1.39
PDGFC-209ENST00000513664 TRAV8-4A0A0B4J246 113 aa6.35□□□□□ -1.39
PDGFC-209ENST00000513664 IGKV2-29A2NJV5 120 aaPredicted RBP6.35□□□□□ -1.39
PDGFC-209ENST00000513664 FGF6P10767 208 aa6.35□□□□□ -1.39
PDGFC-209ENST00000513664 REG3AQ06141 175 aa6.35□□□□□ -1.39
PDGFC-209ENST00000513664 RNASEKQ6P5S7 137 aaKnown RBP6.35□□□□□ -1.39
PDGFC-209ENST00000513664 MRPL52Q86TS9 123 aaKnown RBP6.35□□□□□ -1.39
PDGFC-209ENST00000513664 LINC00269Q8N2A0 174 aa6.35□□□□□ -1.39
PDGFC-209ENST00000513664 DEFB104AQ8WTQ1 72 aa6.35□□□□□ -1.39
PDGFC-209ENST00000513664 C1orf43Q9BWL3 253 aa6.35□□□□□ -1.39
PDGFC-209ENST00000513664 MRPL18Q9H0U6 180 aaKnown RBP6.35□□□□□ -1.39
PDGFC-209ENST00000513664 CSDC2Q9Y534 153 aaKnown RBP6.35□□□□□ -1.39
PDGFC-209ENST00000513664 FAT2Q9NYQ8 4349 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 IGKV2D-24A0A075B6R9 120 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 TGIF2-C20orf24A0A0A6YYL0 155 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 TNP2Q05952 138 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 FABP9Q0Z7S8 132 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 ORMDL2Q53FV1 153 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 DGAT2L7PQ6IED9 249 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 Q8N8P6 123 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 C20orf203Q8NBC4 194 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 OR5A1Q8NGJ0 315 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 TIMM21Q9BVV7 248 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.39
PDGFC-209ENST00000513664 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.4
PDGFC-209ENST00000513664 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
PDGFC-209ENST00000513664 LOC389332A0A1B0GUA5 103 aa6.33□□□□□ -1.4
PDGFC-209ENST00000513664 YPEL4Q96NS1 127 aa6.33□□□□□ -1.4
PDGFC-209ENST00000513664 A0A087WTM6 91 aa6.32□□□□□ -1.4
PDGFC-209ENST00000513664 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
PDGFC-209ENST00000513664 LINC01549A6NIU2 74 aa6.32□□□□□ -1.4
PDGFC-209ENST00000513664 CCL25O15444 150 aa6.32□□□□□ -1.4
PDGFC-209ENST00000513664 KIAA1644Q3SXP7 199 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms