RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 ZNF609O15014 1411 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 NDUFA2O43678 99 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 PPP1R17O96001 155 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 IFITM1P13164 125 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 DOCK1Q14185 1865 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 SCN3BQ9NY72 215 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 NHSL1Q5SYE7 1610 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 FOCADQ5VW36 1801 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 PATJQ8NI35 1801 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 ZNF236Q9UL36 1845 aa-0.17□□□□□ -2.44
SMN1-208ENST00000513228 UNC79Q9P2D8 2635 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 A0A0D9SFI3 127 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 M0R135 149 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 GNG7O60262 68 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 SMIM6P0DI80 62 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 Q6AWC8 147 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 LINC00470Q9BZP3 86 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 PAIP2BQ9ULR5 123 aaKnown RBP-0.18□□□□□ -2.44
SMN1-208ENST00000513228 R4GMQ9 66 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 LRP6O75581 1613 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 CSMD3Q7Z407 3707 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 MBD5Q9P267 1494 aa-0.18□□□□□ -2.44
SMN1-208ENST00000513228 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.19□□□□□ -2.44
SMN1-208ENST00000513228 KDM3BQ7LBC6 1761 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 MYH9P35579 1960 aaKnown RBP-0.19□□□□□ -2.44
SMN1-208ENST00000513228 MYCBP2O75592 4640 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 PLXNB2O15031 1838 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 M0R3E3 92 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 BCE1O60756 84 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 CFDP00746 253 aaPredicted RBP-0.19□□□□□ -2.44
SMN1-208ENST00000513228 WFDC2Q14508 124 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 C10orf128Q5T292 105 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 ARL11Q969Q4 196 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 AMELXQ99217 191 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 SNRNP25Q9BV90 132 aaKnown RBP-0.19□□□□□ -2.44
SMN1-208ENST00000513228 RERGLQ9H628 205 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 NPVFQ9HCQ7 196 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 LENEPQ9Y5L5 61 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 SERP1Q9Y6X1 66 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 LPAP08519 4548 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 MYH8P13535 1937 aa-0.19□□□□□ -2.44
SMN1-208ENST00000513228 WNK3Q9BYP7 1800 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 PPIP5K1Q6PFW1 1433 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 PPRC1Q5VV67 1664 aaKnown RBP-0.2□□□□□ -2.44
SMN1-208ENST00000513228 TRAV22A0A0B4J277 110 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 LOC100130705A0A1B0GUX0 176 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 C10orf142B7Z368 130 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 SELENOWP63302 87 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 CCDC58Q4VC31 144 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 C12orf73Q69YU5 71 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 TTC9CQ8N5M4 171 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 AQP10Q96PS8 301 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 LINC00472Q9H8W2 130 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 HSPG2P98160 4391 aa-0.2□□□□□ -2.44
SMN1-208ENST00000513228 LRRC37A2A6NM11 1700 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 PCLOQ9Y6V0 5065 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 MUC2Q02817 5179 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 CTXND1A0A1B0GTU2 59 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 HAMPP81172 84 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 SPAG11BQ08648 103 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 MEIG1Q5JSS6 88 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 Q5VSD8 79 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 SPAG11AQ6PDA7 123 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 COPS9Q8WXC6 57 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 V9GYH0 126 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 FAM208BQ5VWN6 2430 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 FLNCQ14315 2725 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 TENM4Q6N022 2769 aa-0.21□□□□□ -2.44
SMN1-208ENST00000513228 CACNA1AO00555 2505 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 SHROOM2Q13796 1616 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 FAM25AB3EWG3 89 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 FAM25CB3EWG5 89 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 FAM25GB3EWG6 89 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 I3L2K1 104 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 S100A12P80511 92 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 DEFB109BQ30KR1 87 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 Q8IZM0 81 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 SMIM4Q8WVI0 70 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 TSLPQ969D9 159 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 FAM107BQ9H098 131 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 NAA60Q9H7X0 242 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 NDUFA4L2Q9NRX3 87 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 SPCS1Q9Y6A9 102 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 KIF21AQ7Z4S6 1674 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 RIMS1Q86UR5 1692 aaKnown RBP-0.22□□□□□ -2.44
SMN1-208ENST00000513228 QRICH2Q9H0J4 1663 aa-0.22□□□□□ -2.44
SMN1-208ENST00000513228 KMT2CQ8NEZ4 4911 aaKnown RBP-0.22□□□□□ -2.45
SMN1-208ENST00000513228 DOCK2Q92608 1830 aa-0.22□□□□□ -2.45
SMN1-208ENST00000513228 ABCA2Q9BZC7 2435 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 ERCC6L2Q5T890 1561 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 KMT2AQ03164 3969 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 MIF4GDA9UHW6 222 aaKnown RBP-0.23□□□□□ -2.45
SMN1-208ENST00000513228 K7EP13 123 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 PRM1P04553 51 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 SPRR1AP35321 89 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 BTG2P78543 158 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.23□□□□□ -2.45
SMN1-208ENST00000513228 TP53AIP1Q9HCN2 124 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 SPTBN2O15020 2390 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms