RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 HAMPP81172 84 aa12.65□□□□□ -0.38
CCHCR1-230ENST00000513222 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
CCHCR1-230ENST00000513222 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
CCHCR1-230ENST00000513222 A0A1B0GVG6 124 aa12.64□□□□□ -0.39
CCHCR1-230ENST00000513222 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-230ENST00000513222 REG3AQ06141 175 aa12.64□□□□□ -0.39
CCHCR1-230ENST00000513222 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
CCHCR1-230ENST00000513222 NCR2O95944 276 aa12.63□□□□□ -0.39
CCHCR1-230ENST00000513222 COTL1Q14019 142 aa12.63□□□□□ -0.39
CCHCR1-230ENST00000513222 SMIM7Q9BQ49 75 aa12.63□□□□□ -0.39
CCHCR1-230ENST00000513222 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
CCHCR1-230ENST00000513222 EIF5A2Q9GZV4 153 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-230ENST00000513222 OSTCQ9NRP0 149 aa12.63□□□□□ -0.39
CCHCR1-230ENST00000513222 MYCBP2O75592 4640 aa12.62□□□□□ -0.39
CCHCR1-230ENST00000513222 IGLV4-60A0A075B6I1 120 aa12.62□□□□□ -0.39
CCHCR1-230ENST00000513222 TRBV6-5A0A0K0K1A5 114 aa12.62□□□□□ -0.39
CCHCR1-230ENST00000513222 LINC01620Q4KN68 170 aa12.62□□□□□ -0.39
CCHCR1-230ENST00000513222 TSKUQ8WUA8 353 aa12.62□□□□□ -0.39
CCHCR1-230ENST00000513222 H7C423 109 aa12.61□□□□□ -0.39
CCHCR1-230ENST00000513222 PRSS1P07477 247 aa12.61□□□□□ -0.39
CCHCR1-230ENST00000513222 SMIM15Q7Z3B0 74 aa12.61□□□□□ -0.39
CCHCR1-230ENST00000513222 CLRN3Q8NCR9 226 aa12.61□□□□□ -0.39
CCHCR1-230ENST00000513222 TRAV26-2A0A0B4J265 109 aa12.6□□□□□ -0.39
CCHCR1-230ENST00000513222 ZNF727A8MUV8 499 aa12.6□□□□□ -0.39
CCHCR1-230ENST00000513222 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
CCHCR1-230ENST00000513222 C9orf163Q8N9P6 203 aa12.6□□□□□ -0.39
CCHCR1-230ENST00000513222 AMTP48728 403 aa12.59□□□□□ -0.39
CCHCR1-230ENST00000513222 FAM74A3Q4VXF1 159 aa12.59□□□□□ -0.39
CCHCR1-230ENST00000513222 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-230ENST00000513222 TMEM191AQ9H0A3 160 aa12.59□□□□□ -0.39
CCHCR1-230ENST00000513222 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
CCHCR1-230ENST00000513222 HLA-DQA1P01909 254 aa12.58□□□□□ -0.4
CCHCR1-230ENST00000513222 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.4
CCHCR1-230ENST00000513222 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
CCHCR1-230ENST00000513222 PLA2G1BP04054 148 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-230ENST00000513222 CNBPP62633 177 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-230ENST00000513222 CIRBP-AS1Q8TBR5 109 aa12.57□□□□□ -0.4
CCHCR1-230ENST00000513222 SMDT1Q9H4I9 107 aa12.57□□□□□ -0.4
CCHCR1-230ENST00000513222 V9GYV3 84 aa12.57□□□□□ -0.4
CCHCR1-230ENST00000513222 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
CCHCR1-230ENST00000513222 CEBPGP53567 150 aa12.56□□□□□ -0.4
CCHCR1-230ENST00000513222 KRTAP10-4P60372 401 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-230ENST00000513222 LINC00528Q8N1L1 170 aa12.56□□□□□ -0.4
CCHCR1-230ENST00000513222 HERC1Q15751 4861 aa12.55□□□□□ -0.4
CCHCR1-230ENST00000513222 UBE2L6O14933 153 aa12.55□□□□□ -0.4
CCHCR1-230ENST00000513222 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
CCHCR1-230ENST00000513222 RNF185Q96GF1 192 aa12.55□□□□□ -0.4
CCHCR1-230ENST00000513222 I3L3M4 83 aa12.54□□□□□ -0.4
CCHCR1-230ENST00000513222 ESDP10768 282 aa12.54□□□□□ -0.4
CCHCR1-230ENST00000513222 POLR2KP53803 58 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-230ENST00000513222 TMEM241Q24JQ0 296 aa12.54□□□□□ -0.4
CCHCR1-230ENST00000513222 SDIM1Q6ZPB5 146 aa12.54□□□□□ -0.4
CCHCR1-230ENST00000513222 BORCS7Q96B45 105 aa12.54□□□□□ -0.4
CCHCR1-230ENST00000513222 IGLV10-54A0A075B6I4 117 aa12.53□□□□□ -0.4
CCHCR1-230ENST00000513222 C9JQL5 133 aa12.53□□□□□ -0.4
CCHCR1-230ENST00000513222 RAB4AP20338 218 aa12.53□□□□□ -0.4
CCHCR1-230ENST00000513222 MRAP2Q96G30 205 aa12.53□□□□□ -0.4
CCHCR1-230ENST00000513222 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.41
CCHCR1-230ENST00000513222 GAS8-AS1O95177 125 aa12.52□□□□□ -0.41
CCHCR1-230ENST00000513222 ZNF25P17030 456 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-230ENST00000513222 RPL23P62829 140 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-230ENST00000513222 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-230ENST00000513222 NUP35Q8NFH5 326 aa12.52□□□□□ -0.41
CCHCR1-230ENST00000513222 DEFB104AQ8WTQ1 72 aa12.52□□□□□ -0.41
CCHCR1-230ENST00000513222 TSHBP01222 138 aa12.5□□□□□ -0.41
CCHCR1-230ENST00000513222 APCSP02743 223 aa12.5□□□□□ -0.41
CCHCR1-230ENST00000513222 SLPIP03973 132 aa12.5□□□□□ -0.41
CCHCR1-230ENST00000513222 FGF6P10767 208 aa12.5□□□□□ -0.41
CCHCR1-230ENST00000513222 NAT8Q9UHE5 227 aa12.5□□□□□ -0.41
CCHCR1-230ENST00000513222 SMIM27A0A1W2PRY6 76 aa12.49□□□□□ -0.41
CCHCR1-230ENST00000513222 RIGQ13278 110 aa12.49□□□□□ -0.41
CCHCR1-230ENST00000513222 MRPL52Q86TS9 123 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-230ENST00000513222 ST20Q9HBF5 79 aa12.49□□□□□ -0.41
CCHCR1-230ENST00000513222 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
CCHCR1-230ENST00000513222 PMCHP20382 165 aa12.48□□□□□ -0.41
CCHCR1-230ENST00000513222 RPS10P46783 165 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-230ENST00000513222 SRSF3P84103 164 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-230ENST00000513222 PEA15Q15121 130 aa12.48□□□□□ -0.41
CCHCR1-230ENST00000513222 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
CCHCR1-230ENST00000513222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-230ENST00000513222 hDV102S1A0JD36 115 aa12.47□□□□□ -0.41
CCHCR1-230ENST00000513222 IGKV2-29A2NJV5 120 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-230ENST00000513222 PPP1R17O96001 155 aa12.47□□□□□ -0.41
CCHCR1-230ENST00000513222 AMMECR1LQ6DCA0 310 aa12.47□□□□□ -0.41
CCHCR1-230ENST00000513222 C15orf56Q8N910 161 aa12.47□□□□□ -0.41
CCHCR1-230ENST00000513222 OR5A1Q8NGJ0 315 aa12.47□□□□□ -0.41
CCHCR1-230ENST00000513222 KRTAP29-1A8MX34 341 aaPredicted RBP12.46□□□□□ -0.41
CCHCR1-230ENST00000513222 CFAP161Q6P656 301 aa12.46□□□□□ -0.41
CCHCR1-230ENST00000513222 NRACQ8N912 160 aa12.46□□□□□ -0.41
CCHCR1-230ENST00000513222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.46□□□□□ -0.41
CCHCR1-230ENST00000513222 A0A1B0GW15 77 aa12.45□□□□□ -0.42
CCHCR1-230ENST00000513222 PANO1I0J062 215 aa12.45□□□□□ -0.42
CCHCR1-230ENST00000513222 CHCHD10Q8WYQ3 142 aaPredicted RBP12.45□□□□□ -0.42
CCHCR1-230ENST00000513222 CSDC2Q9Y534 153 aaKnown RBP12.45□□□□□ -0.42
CCHCR1-230ENST00000513222 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.44□□□□□ -0.42
CCHCR1-230ENST00000513222 GAGE12HA6NDE8 117 aa12.44□□□□□ -0.42
CCHCR1-230ENST00000513222 VCYO14598 125 aa12.44□□□□□ -0.42
CCHCR1-230ENST00000513222 FAM104BQ5XKR9 115 aa12.44□□□□□ -0.42
CCHCR1-230ENST00000513222 RNASEKQ6P5S7 137 aaKnown RBP12.44□□□□□ -0.42
CCHCR1-230ENST00000513222 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms