RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 GAGE5Q13069 117 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 GAGE6Q13070 117 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 LOC389332A0A1B0GUA5 103 aa11.9□□□□□ -0.5
HMGCL-209ENST00000513148 PSG8Q9UQ74 426 aa11.9□□□□□ -0.5
HMGCL-209ENST00000513148 CFAP126Q5VTH2 177 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 Q6ZUT4 128 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 FAM19A4Q96LR4 140 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 TRAV12-3A0A0B4J271 114 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 PRM2P04554 102 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 HTN1P15515 57 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 SYT8Q8NBV8 401 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 C20orf78Q9BR46 151 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 MAP1LC3AQ9H492 121 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 EDA2RQ9HAV5 297 aa11.89□□□□□ -0.51
HMGCL-209ENST00000513148 CKS2P33552 79 aa11.88□□□□□ -0.51
HMGCL-209ENST00000513148 RNASE4P34096 147 aaKnown RBP11.88□□□□□ -0.51
HMGCL-209ENST00000513148 PRR9Q5T870 116 aa11.88□□□□□ -0.51
HMGCL-209ENST00000513148 AMN1Q8IY45 258 aa11.88□□□□□ -0.51
HMGCL-209ENST00000513148 Q8NAQ8 132 aa11.88□□□□□ -0.51
HMGCL-209ENST00000513148 LINC01587Q99440 93 aa11.88□□□□□ -0.51
HMGCL-209ENST00000513148 TMEM262E9PQX1 116 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 MIFP14174 115 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 CRIP1P50238 77 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 ZFAND2AQ8N6M9 145 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 TRBV7-3A0A075B6L6 115 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 KLLNB2CW77 178 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 LYRM7Q5U5X0 104 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 WWC2-AS2Q96NR7 200 aa11.87□□□□□ -0.51
HMGCL-209ENST00000513148 EMP1P54849 157 aa11.86□□□□□ -0.51
HMGCL-209ENST00000513148 TCTAP57738 103 aa11.86□□□□□ -0.51
HMGCL-209ENST00000513148 PPDPFLQ8WWR9 84 aa11.86□□□□□ -0.51
HMGCL-209ENST00000513148 NPYP01303 97 aa11.86□□□□□ -0.51
HMGCL-209ENST00000513148 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
HMGCL-209ENST00000513148 Q6ZQT7 251 aa11.86□□□□□ -0.51
HMGCL-209ENST00000513148 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
HMGCL-209ENST00000513148 PRSS1P07477 247 aa11.85□□□□□ -0.51
HMGCL-209ENST00000513148 C11orf68Q9H3H3 251 aaKnown RBP11.85□□□□□ -0.51
HMGCL-209ENST00000513148 C8orf49Q96NF6 230 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 LENEPQ9Y5L5 61 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 TRBV7-9A0A0J9YWB2 115 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 SMIM9A6NGZ8 99 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 M0QXV9 152 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 MT-ATP8P03928 68 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 PLNP26678 52 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
HMGCL-209ENST00000513148 XGP55808 180 aa11.82□□□□□ -0.52
HMGCL-209ENST00000513148 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
HMGCL-209ENST00000513148 TEN1Q86WV5 123 aa11.82□□□□□ -0.52
HMGCL-209ENST00000513148 ANAPC13Q9BS18 74 aa11.82□□□□□ -0.52
HMGCL-209ENST00000513148 SMCPP49901 116 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-209ENST00000513148 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 Q8N8P6 123 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 IL17DQ8TAD2 202 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 CELA1Q9UNI1 258 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 A0A087WX48 190 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 NFE4Q86UQ8 179 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 MAPKAPK5-AS1Q8N8E1 139 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 RNF185Q96GF1 192 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 TPPP3Q9BW30 176 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
HMGCL-209ENST00000513148 TRAV12-1A0A0B4J245 112 aa11.8□□□□□ -0.52
HMGCL-209ENST00000513148 NANOS2P60321 138 aaKnown RBP11.79□□□□□ -0.52
HMGCL-209ENST00000513148 UBE2D3P61077 147 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 UBE2D2P62837 147 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 MYMXA0A1B0GTQ4 84 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 SH2D1AO60880 128 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 ASIPP42127 132 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-209ENST00000513148 C16orf74Q96GX8 76 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 SS18L2Q9UHA2 77 aa11.79□□□□□ -0.52
HMGCL-209ENST00000513148 IGLV2-18A0A075B6J9 118 aa11.78□□□□□ -0.52
HMGCL-209ENST00000513148 TNFRSF6BO95407 300 aa11.78□□□□□ -0.52
HMGCL-209ENST00000513148 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
HMGCL-209ENST00000513148 Q6Q795 121 aa11.78□□□□□ -0.52
HMGCL-209ENST00000513148 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
HMGCL-209ENST00000513148 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.52
HMGCL-209ENST00000513148 TRAV21A0A0B4J279 112 aa11.77□□□□□ -0.52
HMGCL-209ENST00000513148 UBE2D1P51668 147 aa11.77□□□□□ -0.52
HMGCL-209ENST00000513148 PLAC8L1A1L4L8 177 aa11.77□□□□□ -0.53
HMGCL-209ENST00000513148 RHODO00212 210 aa11.77□□□□□ -0.53
HMGCL-209ENST00000513148 MRPL35Q9NZE8 188 aaKnown RBP11.77□□□□□ -0.53
HMGCL-209ENST00000513148 DNAH7Q8WXX0 4024 aa11.76□□□□□ -0.53
HMGCL-209ENST00000513148 FAM159AQ6UWV7 190 aa11.76□□□□□ -0.53
HMGCL-209ENST00000513148 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
HMGCL-209ENST00000513148 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
HMGCL-209ENST00000513148 H7C1H1 209 aa11.75□□□□□ -0.53
HMGCL-209ENST00000513148 SPART-AS1P0CW21 52 aa11.75□□□□□ -0.53
HMGCL-209ENST00000513148 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
HMGCL-209ENST00000513148 PRSS29PA6NIE9 313 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 ANXA2RQ3ZCQ2 193 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 LINC01600Q96MT4 127 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 LINC00467Q9BRT7 94 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 CSMD3Q7Z407 3707 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 GAGE12JA6NER3 117 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 A8MWV9 139 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms