RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 PRB2P02812 416 aaPredicted RBP3.15□□□□□ -1.9
VCAN-209ENST00000513016 RPL39P62891 51 aaKnown RBP3.15□□□□□ -1.9
VCAN-209ENST00000513016 NEXN-AS1Q8NBZ9 246 aa3.15□□□□□ -1.9
VCAN-209ENST00000513016 IGLC3P0DOY3 106 aa3.15□□□□□ -1.9
VCAN-209ENST00000513016 CASC2Q6XLA1 102 aa3.15□□□□□ -1.9
VCAN-209ENST00000513016 NCKAP5O14513 1909 aa3.15□□□□□ -1.9
VCAN-209ENST00000513016 ADAMTS9Q9P2N4 1935 aa3.15□□□□□ -1.9
VCAN-209ENST00000513016 UPK3BQ9BT76 320 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 RBX1P62877 108 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 ZFHX2Q9C0A1 2572 aaPredicted RBP3.15□□□□□ -1.91
VCAN-209ENST00000513016 C2orf16Q68DN1 1984 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 C5orf47Q569G3 176 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 C10orf99Q6UWK7 81 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 TP53TG3Q9ULZ0 132 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 IGLV2-14P01704 120 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 ROS1P08922 2347 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 SVIPQ8NHG7 77 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 DHRS4-AS1Q9P1J3 65 aa3.15□□□□□ -1.91
VCAN-209ENST00000513016 TRBV10-2A0A0K0K1G8 114 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 G3V4G9 280 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 M0R378 163 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 SMIM20Q8N5G0 67 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 SPANXB1Q9NS25 103 aaPredicted RBP3.14□□□□□ -1.91
VCAN-209ENST00000513016 PCNX1Q96RV3 2341 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 UBE2V1Q13404 147 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 SPATA12Q7Z6I5 190 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 P0C879 139 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 KIF26AQ9ULI4 1882 aaPredicted RBP3.14□□□□□ -1.91
VCAN-209ENST00000513016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.14□□□□□ -1.91
VCAN-209ENST00000513016 LECT2O14960 151 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 C20orf173Q96LM9 149 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 PLAC8L1A1L4L8 177 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 AVPP01185 164 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 CLUHP3Q96NS8 147 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 TRBV6-5A0A0K0K1A5 114 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 PYY3Q5JQD4 70 aa3.14□□□□□ -1.91
VCAN-209ENST00000513016 KIAA2026Q5HYC2 2103 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 LOC105371267A0A1B0GV96 52 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 NTN5Q8WTR8 489 aaPredicted RBP3.13□□□□□ -1.91
VCAN-209ENST00000513016 FAM208BQ5VWN6 2430 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 UBE2D2P62837 147 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 CDSNQ15517 529 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 LINC00467Q9BRT7 94 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 DOCK9Q9BZ29 2069 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 IGLC6P0CF74 106 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 ADCYAP1P18509 176 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 C18orf65Q6ZTR6 163 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 ASPHD1Q5U4P2 390 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 HIGD1BQ9P298 99 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 PYGO1Q9Y3Y4 419 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 CADP27708 2225 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 A0A1W2PPM0 123 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 IGKV4-1P06312 121 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 C10orf91Q5T1B1 145 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 A0A0J9YXY3 114 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 DLEU1O43261 78 aa3.13□□□□□ -1.91
VCAN-209ENST00000513016 K7EP13 123 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 K7EP34 96 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 C14orf132Q9NPU4 83 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 WNK2Q9Y3S1 2297 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 SPTAN1Q13813 2472 aaKnown RBP3.12□□□□□ -1.91
VCAN-209ENST00000513016 BPY2O14599 106 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 PROK1P58294 105 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 HIST2H2BDQ6DRA6 164 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 H3BMG7 143 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 ZNF80P51504 273 aaPredicted RBP3.12□□□□□ -1.91
VCAN-209ENST00000513016 OTOGLQ3ZCN5 2332 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 A0A096LNI7 61 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 LINC00959A0A1B0GUT2 108 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 H3BT86 120 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 M0QY20 66 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 EIF4EBP1Q13541 118 aaPredicted RBP3.12□□□□□ -1.91
VCAN-209ENST00000513016 MRPS36P82909 103 aaKnown RBP3.12□□□□□ -1.91
VCAN-209ENST00000513016 PCP2Q8IVA1 136 aa3.12□□□□□ -1.91
VCAN-209ENST00000513016 EML6Q6ZMW3 1958 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 KLLNB2CW77 178 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 FAM229AH3BQW9 127 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 COX17Q14061 63 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 WFDC10AQ9H1F0 79 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 DENND4AQ7Z401 1863 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 ABCA1O95477 2261 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 ODF3L2Q3SX64 289 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 WWC2-AS2Q96NR7 200 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 NBASA2RRP1 2371 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 COL5A1P20908 1838 aaPredicted RBP3.11□□□□□ -1.91
VCAN-209ENST00000513016 OBSL1O75147 1896 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 TRAV23DV6A0A075B6W5 121 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 K7ERS5 55 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 EGFEM1PQ0D2K5 195 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 Q6ZS46 218 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 DCANP1Q8TF63 244 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 RETNQ9HD89 108 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 IGLV4-3A0A075B6K6 122 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 GDF5OSQ5U4N7 250 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
VCAN-209ENST00000513016 WFDC9Q8NEX5 89 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 MLST8Q9BVC4 326 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 HEATR5AQ86XA9 2040 aa3.11□□□□□ -1.91
VCAN-209ENST00000513016 TRBV30A0A0K0K1B3 111 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms