RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 YAE1D1Q9NRH1 226 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 IGHV3-73A0A0B4J1V6 119 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 RBMY1BA6NDE4 496 aaKnown RBP8.42□□□□□ -1.06
SNX25-205ENST00000512853 RBMY1EA6NEQ0 496 aaKnown RBP8.42□□□□□ -1.06
SNX25-205ENST00000512853 KNCNA6PVL3 124 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 RBMY1DP0C7P1 496 aaKnown RBP8.42□□□□□ -1.06
SNX25-205ENST00000512853 Q6Q795 121 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 IFITM1P13164 125 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 TMEM61Q8N0U2 210 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 DNAJC30Q96LL9 226 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 UBE2E2Q96LR5 201 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 ANAPC13Q9BS18 74 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 BEX4Q9NWD9 120 aaPredicted RBP8.41□□□□□ -1.06
SNX25-205ENST00000512853 IGLV5-45A0A087WSX0 123 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 DSCR9P59020 149 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
SNX25-205ENST00000512853 Q6ZSN1 163 aa8.41□□□□□ -1.06
SNX25-205ENST00000512853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.068e-9■■■■■ 28.9
SNX25-205ENST00000512853 H7C423 109 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 SNCGO76070 127 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 PRSS2P07478 247 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 TIRAPP58753 221 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 DEFB131AP59861 70 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 C2orf82Q6UX34 121 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 DUX5Q96PT3 197 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 DUX3Q96PT4 197 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 ZNF702PQ9H963 129 aa8.4□□□□□ -1.06
SNX25-205ENST00000512853 TEX49A0A1B0GTD5 131 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 LST1O00453 97 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 NDUFA1O15239 70 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 IGHV3-53P01767 116 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 COX6CP09669 75 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 BEAN1Q3B7T3 259 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 VPREB3Q9UKI3 123 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.39□□□□□ -1.07
SNX25-205ENST00000512853 IGKV2-29A2NJV5 120 aaPredicted RBP8.39□□□□□ -1.07
SNX25-205ENST00000512853 J3QLI3 93 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 GAGE2BQ13066 116 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 MRPL23Q16540 153 aaKnown RBP8.39□□□□□ -1.07
SNX25-205ENST00000512853 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 DEFB121Q5J5C9 76 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 LINC01356Q8N9X3 169 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 Q9UF83 564 aa8.39□□□□□ -1.07
SNX25-205ENST00000512853 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
SNX25-205ENST00000512853 A8MZ25 164 aa8.38□□□□□ -1.07
SNX25-205ENST00000512853 NHLRC4P0CG21 123 aaPredicted RBP8.38□□□□□ -1.07
SNX25-205ENST00000512853 C11orf72Q8NBR9 251 aa8.38□□□□□ -1.07
SNX25-205ENST00000512853 A0A096LNT2 108 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 FAM240AA0A1B0GVK7 77 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 RS1O15537 224 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 CRLF1O75462 422 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 SVEP1Q4LDE5 3571 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 FSHBP01225 129 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 HTN1P15515 57 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 CLEC2BQ92478 149 aa8.37□□□□□ -1.07
SNX25-205ENST00000512853 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
SNX25-205ENST00000512853 SLURP1P55000 103 aa8.36□□□□□ -1.07
SNX25-205ENST00000512853 NDUFV3P56181 108 aaKnown RBP8.36□□□□□ -1.07
SNX25-205ENST00000512853 Q6ZSV7 163 aa8.36□□□□□ -1.07
SNX25-205ENST00000512853 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
SNX25-205ENST00000512853 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
SNX25-205ENST00000512853 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
SNX25-205ENST00000512853 NPC2P61916 151 aa8.35□□□□□ -1.07
SNX25-205ENST00000512853 GAGE5Q13069 117 aa8.35□□□□□ -1.07
SNX25-205ENST00000512853 GAGE6Q13070 117 aa8.35□□□□□ -1.07
SNX25-205ENST00000512853 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
SNX25-205ENST00000512853 MAP6D1Q9H9H5 199 aa8.35□□□□□ -1.07
SNX25-205ENST00000512853 PRM2P04554 102 aa8.35□□□□□ -1.07
SNX25-205ENST00000512853 Q6YL49 198 aa8.35□□□□□ -1.07
SNX25-205ENST00000512853 IGHV3-38A0A0C4DH36 116 aa8.34□□□□□ -1.07
SNX25-205ENST00000512853 INSP01308 110 aa8.34□□□□□ -1.07
SNX25-205ENST00000512853 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.34□□□□□ -1.07
SNX25-205ENST00000512853 IGHV3OR16-12A0A075B7B8 117 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 HERVK_113P63121 156 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 C18orf65Q6ZTR6 163 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
SNX25-205ENST00000512853 ZFHX3Q15911 3703 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 SORL1Q92673 2214 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
SNX25-205ENST00000512853 SVIPQ8NHG7 77 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 LINC01587Q99440 93 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
SNX25-205ENST00000512853 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 COX6A2Q02221 97 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 DEFB136Q30KP8 78 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 Q8N2B8 174 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 DAND5Q8N907 189 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 PPDPFQ9H3Y8 114 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 CELSR1Q9NYQ6 3014 aa8.32□□□□□ -1.08
SNX25-205ENST00000512853 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
SNX25-205ENST00000512853 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
SNX25-205ENST00000512853 Q9H8V8 135 aa8.31□□□□□ -1.08
SNX25-205ENST00000512853 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
SNX25-205ENST00000512853 COX7A2LO14548 114 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms