RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 PKHD1L1Q86WI1 4243 aa7.83□□□□□ -1.16
CDK7-208ENST00000512687 HERC1Q15751 4861 aa7.83□□□□□ -1.16
CDK7-208ENST00000512687 IGHV1-24A0A0C4DH33 117 aa7.83□□□□□ -1.16
CDK7-208ENST00000512687 H7C1H1 209 aa7.83□□□□□ -1.16
CDK7-208ENST00000512687 HLA-DQA1P01909 254 aa7.83□□□□□ -1.16
CDK7-208ENST00000512687 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
CDK7-208ENST00000512687 GTSF1Q8WW33 167 aa7.83□□□□□ -1.16
CDK7-208ENST00000512687 TRAV26-2A0A0B4J265 109 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 A0A1B0GVG6 124 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 PKIAP61925 76 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 BLOC1S1P78537 153 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 MIAQ16674 131 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 LINC00269Q8N2A0 174 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 GATD1Q8NB37 220 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 C20orf203Q8NBC4 194 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 GFRA4Q9GZZ7 299 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 NIT2Q9NQR4 276 aa7.82□□□□□ -1.16
CDK7-208ENST00000512687 IGLV4-60A0A075B6I1 120 aa7.81□□□□□ -1.16
CDK7-208ENST00000512687 TMEM250H0YL14 139 aa7.81□□□□□ -1.16
CDK7-208ENST00000512687 FOXA3P55318 350 aaPredicted RBP7.81□□□□□ -1.16
CDK7-208ENST00000512687 TWIST1Q15672 202 aa7.81□□□□□ -1.16
CDK7-208ENST00000512687 PGLYRP4Q96LB8 373 aa7.81□□□□□ -1.16
CDK7-208ENST00000512687 PRSS1P07477 247 aa7.8□□□□□ -1.16
CDK7-208ENST00000512687 CEBPGP53567 150 aa7.8□□□□□ -1.16
CDK7-208ENST00000512687 RPL39LQ96EH5 51 aaKnown RBP7.8□□□□□ -1.16
CDK7-208ENST00000512687 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
CDK7-208ENST00000512687 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
CDK7-208ENST00000512687 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
CDK7-208ENST00000512687 GATCO43716 136 aaKnown RBP7.79□□□□□ -1.16
CDK7-208ENST00000512687 REG3AQ06141 175 aa7.79□□□□□ -1.16
CDK7-208ENST00000512687 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
CDK7-208ENST00000512687 FAM231DQ6ZW35 169 aa7.79□□□□□ -1.16
CDK7-208ENST00000512687 CHAC1Q9BUX1 264 aa7.78□□□□□ -1.16
CDK7-208ENST00000512687 A0A1B0GUV1 79 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 GAS8-AS1O95177 125 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 AMTP48728 403 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
CDK7-208ENST00000512687 COTL1Q14019 142 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 LINC01551Q86U37 167 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 CIRBP-AS1Q8TBR5 109 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 FAM210AQ96ND0 272 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 SMIM7Q9BQ49 75 aa7.77□□□□□ -1.17
CDK7-208ENST00000512687 A8MWL6 223 aa7.76□□□□□ -1.17
CDK7-208ENST00000512687 SRP19P09132 144 aaKnown RBP7.76□□□□□ -1.17
CDK7-208ENST00000512687 SRSF3P84103 164 aaKnown RBP7.76□□□□□ -1.17
CDK7-208ENST00000512687 CT83Q5H943 113 aa7.76□□□□□ -1.17
CDK7-208ENST00000512687 EIF5A2Q9GZV4 153 aaKnown RBP7.76□□□□□ -1.17
CDK7-208ENST00000512687 PANO1I0J062 215 aa7.75□□□□□ -1.17
CDK7-208ENST00000512687 UBE2L6O14933 153 aa7.75□□□□□ -1.17
CDK7-208ENST00000512687 NDUFS6O75380 124 aaKnown RBP7.75□□□□□ -1.17
CDK7-208ENST00000512687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
CDK7-208ENST00000512687 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
CDK7-208ENST00000512687 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
CDK7-208ENST00000512687 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
CDK7-208ENST00000512687 C9orf163Q8N9P6 203 aa7.74□□□□□ -1.17
CDK7-208ENST00000512687 TRAV8-4A0A0B4J246 113 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 SDHAF1A6NFY7 115 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 HIGD1CA8MV81 97 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 C9JQL5 133 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 SMIM15Q7Z3B0 74 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 TSKUQ8WUA8 353 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 RNF185Q96GF1 192 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 OSTCQ9NRP0 149 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
CDK7-208ENST00000512687 V9GYV3 84 aa7.73□□□□□ -1.17
CDK7-208ENST00000512687 IGKV3OR2-268A0A0C4DH90 116 aa7.72□□□□□ -1.17
CDK7-208ENST00000512687 FAM231BA6NCW3 169 aa7.72□□□□□ -1.17
CDK7-208ENST00000512687 NCR2O95944 276 aa7.72□□□□□ -1.17
CDK7-208ENST00000512687 APCSP02743 223 aa7.72□□□□□ -1.17
CDK7-208ENST00000512687 SLPIP03973 132 aa7.72□□□□□ -1.17
CDK7-208ENST00000512687 RPS10P46783 165 aaKnown RBP7.72□□□□□ -1.17
CDK7-208ENST00000512687 C15orf56Q8N910 161 aa7.72□□□□□ -1.17
CDK7-208ENST00000512687 FAT3Q8TDW7 4589 aa7.72□□□□□ -1.17
CDK7-208ENST00000512687 LRP1Q07954 4544 aaKnown RBP7.72□□□□□ -1.17
CDK7-208ENST00000512687 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 A0A1B0GUT8 65 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 hDV102S1A0JD36 115 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 TSHBP01222 138 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 TEX261Q6UWH6 196 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 CLRN3Q8NCR9 226 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 ISOC2Q96AB3 205 aa7.71□□□□□ -1.18
CDK7-208ENST00000512687 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 I3L3M4 83 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 FGF6P10767 208 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 RAB4AP20338 218 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
CDK7-208ENST00000512687 RPL23P62829 140 aaKnown RBP7.7□□□□□ -1.18
CDK7-208ENST00000512687 AMN1Q8IY45 258 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 BORCS7Q96B45 105 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 TMEM191AQ9H0A3 160 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 TMEM242Q9NWH2 141 aa7.7□□□□□ -1.18
CDK7-208ENST00000512687 SMKR1H3BMG3 65 aa7.69□□□□□ -1.18
CDK7-208ENST00000512687 H7C423 109 aa7.69□□□□□ -1.18
CDK7-208ENST00000512687 ESDP10768 282 aa7.69□□□□□ -1.18
CDK7-208ENST00000512687 PMCHP20382 165 aa7.69□□□□□ -1.18
CDK7-208ENST00000512687 AMMECR1LQ6DCA0 310 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms