RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 C9orf62Q8N4C0 152 aa9.44□□□□□ -0.9
CCHCR1-229ENST00000512418 PKHD1L1Q86WI1 4243 aa9.44□□□□□ -0.9
CCHCR1-229ENST00000512418 hDV102S1A0JD36 115 aa9.43□□□□□ -0.9
CCHCR1-229ENST00000512418 PANO1I0J062 215 aa9.43□□□□□ -0.9
CCHCR1-229ENST00000512418 UBE2L6O14933 153 aa9.43□□□□□ -0.9
CCHCR1-229ENST00000512418 COTL1Q14019 142 aa9.43□□□□□ -0.9
CCHCR1-229ENST00000512418 WDR73Q6P4I2 378 aa9.43□□□□□ -0.9
CCHCR1-229ENST00000512418 AMTP48728 403 aa9.42□□□□□ -0.9
CCHCR1-229ENST00000512418 CNFNQ9BYD5 112 aa9.42□□□□□ -0.9
CCHCR1-229ENST00000512418 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
CCHCR1-229ENST00000512418 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
CCHCR1-229ENST00000512418 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.41□□□□□ -0.9
CCHCR1-229ENST00000512418 TAGLN2P37802 199 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-229ENST00000512418 HNRNPA3P51991 378 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-229ENST00000512418 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-229ENST00000512418 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
CCHCR1-229ENST00000512418 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
CCHCR1-229ENST00000512418 IGHV3-64A0A075B6Q5 118 aa9.4□□□□□ -0.9
CCHCR1-229ENST00000512418 TWIST1Q15672 202 aa9.4□□□□□ -0.9
CCHCR1-229ENST00000512418 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
CCHCR1-229ENST00000512418 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
CCHCR1-229ENST00000512418 SLPIP03973 132 aa9.38□□□□□ -0.91
CCHCR1-229ENST00000512418 TCTE3Q8IZS6 198 aa9.38□□□□□ -0.91
CCHCR1-229ENST00000512418 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
CCHCR1-229ENST00000512418 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
CCHCR1-229ENST00000512418 RNASE7Q9H1E1 156 aaKnown RBP9.38□□□□□ -0.91
CCHCR1-229ENST00000512418 TRAV26-2A0A0B4J265 109 aa9.37□□□□□ -0.91
CCHCR1-229ENST00000512418 K7EN84 100 aa9.37□□□□□ -0.91
CCHCR1-229ENST00000512418 NCR2O95944 276 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 CFAP161Q6P656 301 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
CCHCR1-229ENST00000512418 A0A087WYN8 130 aa9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 GAGE12HA6NDE8 117 aa9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 CHTF8P0CG12 524 aa9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 Q6ZNX1 250 aa9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 GTSF1Q8WW33 167 aa9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 RPL39LQ96EH5 51 aaKnown RBP9.35□□□□□ -0.91
CCHCR1-229ENST00000512418 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
CCHCR1-229ENST00000512418 H7C423 109 aa9.34□□□□□ -0.91
CCHCR1-229ENST00000512418 APCSP02743 223 aa9.34□□□□□ -0.91
CCHCR1-229ENST00000512418 TEX261Q6UWH6 196 aa9.34□□□□□ -0.91
CCHCR1-229ENST00000512418 Q6ZRU5 148 aa9.34□□□□□ -0.91
CCHCR1-229ENST00000512418 TMEM250H0YL14 139 aa9.33□□□□□ -0.92
CCHCR1-229ENST00000512418 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
CCHCR1-229ENST00000512418 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 IGKV2-29A2NJV5 120 aaPredicted RBP9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 SDHAF1A6NFY7 115 aa9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 FGF6P10767 208 aa9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 RPS10P46783 165 aaKnown RBP9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 FOXA3P55318 350 aaPredicted RBP9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 COX6A2Q02221 97 aa9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 RNASEKQ6P5S7 137 aaKnown RBP9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 FAM231DQ6ZW35 169 aa9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 PLAC8Q9NZF1 115 aa9.32□□□□□ -0.92
CCHCR1-229ENST00000512418 GVQW2A0A096LPI5 108 aaPredicted RBP9.31□□□□□ -0.92
CCHCR1-229ENST00000512418 A8MWL6 223 aa9.31□□□□□ -0.92
CCHCR1-229ENST00000512418 GATCO43716 136 aaKnown RBP9.31□□□□□ -0.92
CCHCR1-229ENST00000512418 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
CCHCR1-229ENST00000512418 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
CCHCR1-229ENST00000512418 I3L3M4 83 aa9.3□□□□□ -0.92
CCHCR1-229ENST00000512418 NDUFS6O75380 124 aaKnown RBP9.3□□□□□ -0.92
CCHCR1-229ENST00000512418 MT1HL1P0DM35 61 aa9.3□□□□□ -0.92
CCHCR1-229ENST00000512418 CT83Q5H943 113 aa9.3□□□□□ -0.92
CCHCR1-229ENST00000512418 C7orf33Q8WU49 177 aa9.3□□□□□ -0.92
CCHCR1-229ENST00000512418 PHOX2AO14813 284 aa9.29□□□□□ -0.92
CCHCR1-229ENST00000512418 PMCHP20382 165 aa9.29□□□□□ -0.92
CCHCR1-229ENST00000512418 BLOC1S1P78537 153 aa9.29□□□□□ -0.92
CCHCR1-229ENST00000512418 FOXI1Q12951 378 aa9.29□□□□□ -0.92
CCHCR1-229ENST00000512418 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
CCHCR1-229ENST00000512418 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
CCHCR1-229ENST00000512418 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
CCHCR1-229ENST00000512418 IGKV2-24A0A0C4DH68 120 aa9.28□□□□□ -0.92
CCHCR1-229ENST00000512418 FAM231BA6NCW3 169 aa9.28□□□□□ -0.92
CCHCR1-229ENST00000512418 MAJINQ3KP22 176 aa9.28□□□□□ -0.92
CCHCR1-229ENST00000512418 ALKAL2Q6UX46 152 aa9.28□□□□□ -0.92
CCHCR1-229ENST00000512418 PRSS3P2Q8NHM4 247 aa9.28□□□□□ -0.92
CCHCR1-229ENST00000512418 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
CCHCR1-229ENST00000512418 FAM210AQ96ND0 272 aa9.28□□□□□ -0.92
CCHCR1-229ENST00000512418 XCL1P47992 114 aa9.27□□□□□ -0.93
CCHCR1-229ENST00000512418 CEBPGP53567 150 aa9.27□□□□□ -0.93
CCHCR1-229ENST00000512418 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.93
CCHCR1-229ENST00000512418 MRAP2Q96G30 205 aa9.27□□□□□ -0.93
CCHCR1-229ENST00000512418 LINC00959A0A1B0GUT2 108 aa9.26□□□□□ -0.93
CCHCR1-229ENST00000512418 TSHBP01222 138 aa9.26□□□□□ -0.93
CCHCR1-229ENST00000512418 ESDP10768 282 aa9.26□□□□□ -0.93
CCHCR1-229ENST00000512418 STPG4Q8N801 248 aa9.26□□□□□ -0.93
CCHCR1-229ENST00000512418 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
CCHCR1-229ENST00000512418 PKIGQ9Y2B9 76 aa9.26□□□□□ -0.93
CCHCR1-229ENST00000512418 IGHV1-58A0A0C4DH39 117 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 A0A1B0GUT8 65 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 HIGD1CA8MV81 97 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 CCL25O15444 150 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms