RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 RPL39LQ96EH5 51 aaKnown RBP3.53□□□□□ -1.84
MSH3-202ENST00000512258 NDUFAF3Q9BU61 184 aa3.53□□□□□ -1.84
MSH3-202ENST00000512258 SMCO4Q9NRQ5 59 aa3.53□□□□□ -1.84
MSH3-202ENST00000512258 PRO0255Q9UI72 69 aa3.53□□□□□ -1.84
MSH3-202ENST00000512258 HHLA3Q9XRX5 114 aa3.53□□□□□ -1.84
MSH3-202ENST00000512258 TRBV24-1A0A075B6N3 115 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 TRAV9-1A0A075B6T8 112 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 A0A1B0GW15 77 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 TRBV6-4A0A1B0GX49 114 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 COLCA2A8K830 154 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 RHODO00212 210 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 SMIM15Q7Z3B0 74 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 NEGR1Q7Z3B1 354 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 ATP5L2Q7Z4Y8 100 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 FAM210BQ96KR6 192 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 APLNQ9ULZ1 77 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 TENM2Q9NT68 2774 aa3.52□□□□□ -1.85
MSH3-202ENST00000512258 IGHV3-38A0A0C4DH36 116 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 NUPR2A6NF83 97 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 D6R8Y8 96 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 NPYP01303 97 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 LINC00694P0DN24 101 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 RHOHQ15669 191 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 CASC10Q5T4H9 136 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 RASL11AQ6T310 242 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 ZNRF2Q8NHG8 242 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 GNB1LQ9BYB4 327 aa3.51□□□□□ -1.85
MSH3-202ENST00000512258 DYNC2H1Q8NCM8 4307 aaKnown RBP3.5□□□□□ -1.85
MSH3-202ENST00000512258 CIDEAO60543 219 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 TNFRSF6BO95407 300 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 HLA-DQA1P01909 254 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 APCSP02743 223 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 S100A8P05109 93 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 RAB5AP20339 215 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 CKS2P33552 79 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 UBE2D3P61077 147 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 SUMO2P61956 95 aaKnown RBP3.5□□□□□ -1.85
MSH3-202ENST00000512258 UBE2D2P62837 147 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 FABP9Q0Z7S8 132 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 ODF1Q14990 250 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 ESRGQ1W209 222 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 OR10J3Q5JRS4 329 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.5□□□□□ -1.85
MSH3-202ENST00000512258 FRZBQ92765 325 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 MRAP2Q96G30 205 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 PRELID3AQ96N28 172 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 PRADC1Q9BSG0 188 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 TM2D2Q9BX73 214 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 NIT2Q9NQR4 276 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 TRAPPC1Q9Y5R8 145 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 ICOSQ9Y6W8 199 aa3.5□□□□□ -1.85
MSH3-202ENST00000512258 PLECQ15149 4684 aaKnown RBP3.49□□□□□ -1.85
MSH3-202ENST00000512258 TRBV7-3A0A075B6L6 115 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 TRBV10-1A0A0K0K1A3 114 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 LOC389332A0A1B0GUA5 103 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 SDHAF1A6NFY7 115 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 H3BNG1 76 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 C3orf84H3BNL1 204 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 PHOX2AO14813 284 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 TRGC2P03986 189 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 SRIP30626 198 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 MRPL23Q16540 153 aaKnown RBP3.49□□□□□ -1.85
MSH3-202ENST00000512258 IQCJQ1A5X6 159 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 LYPD5Q6UWN5 251 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 NTM-AS1Q6ZSK4 140 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 ATP6V0E2Q8NHE4 81 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 ALKBH7Q9BT30 221 aaPredicted RBP3.49□□□□□ -1.85
MSH3-202ENST00000512258 TMEM70Q9BUB7 260 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 KLK5Q9Y337 293 aaPredicted RBP3.49□□□□□ -1.85
MSH3-202ENST00000512258 LINC00588Q9Y4M8 146 aa3.49□□□□□ -1.85
MSH3-202ENST00000512258 LYSTQ99698 3801 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 IGLV2-18A0A075B6J9 118 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 TRBV6-5A0A0K0K1A5 114 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 A0A1B0GUV1 79 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 H7C1H1 209 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 TSHBP01222 138 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 MT-ND6P03923 174 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 POLR2KP53803 58 aaKnown RBP3.48□□□□□ -1.85
MSH3-202ENST00000512258 COX19Q49B96 90 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 ORMDL3Q8N138 153 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 C15orf53Q8NAA6 179 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 DNAJC30Q96LL9 226 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 ST20Q9HBF5 79 aa3.48□□□□□ -1.85
MSH3-202ENST00000512258 TCAPO15273 167 aa3.47□□□□□ -1.85
MSH3-202ENST00000512258 PPBPP02775 128 aa3.47□□□□□ -1.85
MSH3-202ENST00000512258 IFI27P40305 119 aaPredicted RBP3.47□□□□□ -1.85
MSH3-202ENST00000512258 WFDC10BQ8IUB3 73 aa3.47□□□□□ -1.85
MSH3-202ENST00000512258 URB1-AS1Q96HZ7 61 aa3.47□□□□□ -1.85
MSH3-202ENST00000512258 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
MSH3-202ENST00000512258 GTSF1LQ9H1H1 148 aa3.47□□□□□ -1.85
MSH3-202ENST00000512258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.46□□□□□ -1.86
MSH3-202ENST00000512258 TRBV6-8A0A0A6YYG3 113 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 IGKV2-29A2NJV5 120 aaPredicted RBP3.46□□□□□ -1.86
MSH3-202ENST00000512258 I3L3M4 83 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 LY6G6CO95867 125 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 PMCHP20382 165 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 COTL1Q14019 142 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 DAZ4Q86SG3 579 aaKnown RBP3.46□□□□□ -1.86
MSH3-202ENST00000512258 C18orf32Q8TCD1 76 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms