RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 KRTAP26-1Q6PEX3 210 aa4.56□□□□□ -1.68
HMGCR-211ENST00000512053 SPINK6Q6UWN8 80 aa4.56□□□□□ -1.68
HMGCR-211ENST00000512053 STPG4Q8N801 248 aa4.56□□□□□ -1.68
HMGCR-211ENST00000512053 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
HMGCR-211ENST00000512053 AP1S3Q96PC3 154 aa4.56□□□□□ -1.68
HMGCR-211ENST00000512053 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
HMGCR-211ENST00000512053 ALG5Q9Y673 324 aa4.56□□□□□ -1.68
HMGCR-211ENST00000512053 A0A0J9YXV3 536 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 SNAI2O43623 268 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 CXCL1P09341 107 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 OR5AL1P0C617 328 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 FHITP49789 147 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 PRR3P79522 188 aaKnown RBP4.55□□□□□ -1.68
HMGCR-211ENST00000512053 ODF1Q14990 250 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 BAGE2Q86Y30 109 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 MED28Q9H204 178 aa4.55□□□□□ -1.68
HMGCR-211ENST00000512053 IGLV4-60A0A075B6I1 120 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 IGKV3OR2-268A0A0C4DH90 116 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 MAP1LC3B2A6NCE7 125 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 GAGE12HA6NDE8 117 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 GAS8-AS1O95177 125 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 NKX2-5P52952 324 aaPredicted RBP4.54□□□□□ -1.68
HMGCR-211ENST00000512053 ZNF726P1Q15940 193 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 RPL7L1Q6DKI1 246 aaKnown RBP4.54□□□□□ -1.68
HMGCR-211ENST00000512053 AKAP14Q86UN6 197 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 C20orf203Q8NBC4 194 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 PRSS3P2Q8NHM4 247 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 TPPP3Q9BW30 176 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 MAP1LC3BQ9GZQ8 125 aa4.54□□□□□ -1.68
HMGCR-211ENST00000512053 M0QY20 66 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 PAGE4O60829 102 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 AMTP48728 403 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 COTL1Q14019 142 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 HIGD2BQ4VC39 106 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 AMMECR1LQ6DCA0 310 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 Q6ZRP5 223 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 VPS13BQ7Z7G8 4022 aa4.53□□□□□ -1.68
HMGCR-211ENST00000512053 FXYD6-FXYD2A0A087WZ82 144 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 XKRY2A2RUG3 117 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 FAM231BA6NCW3 169 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 CACNG7P62955 275 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 RASL11AQ6T310 242 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 TMUB2Q71RG4 321 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 FER1L6-AS1Q8NA97 138 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 PGLYRP4Q96LB8 373 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 NIT2Q9NQR4 276 aa4.52□□□□□ -1.69
HMGCR-211ENST00000512053 TRGC1P0CF51 173 aa4.51□□□□□ -1.69
HMGCR-211ENST00000512053 RPS20P60866 119 aaKnown RBP4.51□□□□□ -1.69
HMGCR-211ENST00000512053 SUMO4Q6EEV6 95 aa4.51□□□□□ -1.69
HMGCR-211ENST00000512053 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
HMGCR-211ENST00000512053 C15orf56Q8N910 161 aa4.51□□□□□ -1.69
HMGCR-211ENST00000512053 SFT2D1Q8WV19 159 aa4.51□□□□□ -1.69
HMGCR-211ENST00000512053 CHCHD10Q8WYQ3 142 aaPredicted RBP4.51□□□□□ -1.69
HMGCR-211ENST00000512053 GFRA4Q9GZZ7 299 aa4.51□□□□□ -1.69
HMGCR-211ENST00000512053 HMCN2Q8NDA2 5059 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 A0A096LNI7 61 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 F2Z2F3 143 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 ZNF561-AS1K7EIQ3 104 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 GIPP09681 153 aaPredicted RBP4.5□□□□□ -1.69
HMGCR-211ENST00000512053 TCTE3Q8IZS6 198 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 OR2D3Q8NGH3 330 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 BTF3L4Q96K17 158 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 MLST8Q9BVC4 326 aa4.5□□□□□ -1.69
HMGCR-211ENST00000512053 GVQW2A0A096LPI5 108 aaPredicted RBP4.49□□□□□ -1.69
HMGCR-211ENST00000512053 SRSF9Q13242 221 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGCR-211ENST00000512053 Q5BKY6 102 aa4.49□□□□□ -1.69
HMGCR-211ENST00000512053 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
HMGCR-211ENST00000512053 KCNRGQ8N5I3 272 aa4.49□□□□□ -1.69
HMGCR-211ENST00000512053 FAM213BQ8TBF2 198 aa4.49□□□□□ -1.69
HMGCR-211ENST00000512053 ISOC2Q96AB3 205 aa4.49□□□□□ -1.69
HMGCR-211ENST00000512053 TMEM101Q96IK0 257 aa4.49□□□□□ -1.69
HMGCR-211ENST00000512053 CARD19Q96LW7 228 aa4.49□□□□□ -1.69
HMGCR-211ENST00000512053 TRAV26-2A0A0B4J265 109 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 IGHV1-58A0A0C4DH39 117 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 A0A1B0GV50 99 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 UMAD1C9J7I0 102 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 H7C423 109 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 NCR2O95944 276 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 IFNA1P01562 189 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 NTF3P20783 257 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 SS18Q15532 418 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 SMIM15Q7Z3B0 74 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 BIN3Q9NQY0 253 aa4.48□□□□□ -1.69
HMGCR-211ENST00000512053 A0A0U1RQV1 116 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 ARPC5O15511 151 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 APCSP02743 223 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 MT-ND6P03923 174 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 IGLC6P0CF74 106 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 ZNF25P17030 456 aaPredicted RBP4.47□□□□□ -1.69
HMGCR-211ENST00000512053 RPL35P42766 123 aaKnown RBP4.47□□□□□ -1.69
HMGCR-211ENST00000512053 XCL1P47992 114 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 SYCNQ0VAF6 134 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 GAGE2BQ13066 116 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 TWIST1Q15672 202 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 LYZL1Q6UWQ5 148 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 MBD3L1Q8WWY6 194 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 PSORS1C2Q9UIG4 136 aa4.47□□□□□ -1.69
HMGCR-211ENST00000512053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.46□□□□□ -1.7
HMGCR-211ENST00000512053 LOC107984640A0A0U1RRK4 108 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms