RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 IFITM10A6NMD0 228 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 LINC00694P0DN24 101 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 KRTDAPP60985 99 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 Q8N8P6 123 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 Q8N976 141 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 TSHBP01222 138 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 Q0VG73 95 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 LAGE3Q14657 143 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 OR10D4PQ8NGN7 298 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 IGLV2-18A0A075B6J9 118 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 UBE2D3P61077 147 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 UBE2D2P62837 147 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 HIST3H2BBQ8N257 126 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 PTH2Q96A98 100 aa5.6□□□□□ -1.51
SMAD1-209ENST00000511125 C5orf52A6NGY3 159 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 NHLRC4P0CG21 123 aaPredicted RBP5.59□□□□□ -1.51
SMAD1-209ENST00000511125 PIK3CD-AS1Q5SR53 167 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 TRAV10A0A0B4J240 114 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 IGHV3-30P01768 117 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 IGHV3-33P01772 117 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 IGHV3-30-3P0DP02 117 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 IGHV3-30-5P0DP03 117 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 C2orf66Q6UXQ4 117 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 ATOH7Q8N100 152 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 DNAJC30Q96LL9 226 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 HIST1H2BLQ99880 126 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 C20orf78Q9BR46 151 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 NXT2Q9NPJ8 142 aaKnown RBP5.59□□□□□ -1.51
SMAD1-209ENST00000511125 ICOSQ9Y6W8 199 aa5.59□□□□□ -1.51
SMAD1-209ENST00000511125 A0A096LNJ9 63 aa5.59□□□□□ -1.52
SMAD1-209ENST00000511125 MRPL23Q16540 153 aaKnown RBP5.59□□□□□ -1.52
SMAD1-209ENST00000511125 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
SMAD1-209ENST00000511125 ESRGQ1W209 222 aa5.58□□□□□ -1.52
SMAD1-209ENST00000511125 STARD9Q9P2P6 4700 aa5.58□□□□□ -1.52
SMAD1-209ENST00000511125 TRBV27A0A0K0K1C4 114 aa5.58□□□□□ -1.52
SMAD1-209ENST00000511125 PRSS1P07477 247 aa5.58□□□□□ -1.52
SMAD1-209ENST00000511125 DGAT2L7PQ6IED9 249 aa5.58□□□□□ -1.52
SMAD1-209ENST00000511125 SCGB3A1Q96QR1 104 aa5.58□□□□□ -1.52
SMAD1-209ENST00000511125 TRBV10-1A0A0K0K1A3 114 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 PRSS29PA6NIE9 313 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 UBE2L6O14933 153 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 PPP1R17O96001 155 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 AMMECR1LQ6DCA0 310 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 TEX48A0A1B0GUV7 120 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 PACRGQ96M98 296 aaPredicted RBP5.57□□□□□ -1.52
SMAD1-209ENST00000511125 LAMTOR2Q9Y2Q5 125 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 PLECQ15149 4684 aaKnown RBP5.57□□□□□ -1.52
SMAD1-209ENST00000511125 DNAH7Q8WXX0 4024 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 TRBV6-5A0A0K0K1A5 114 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 HBDP02042 147 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 LYPD5Q6UWN5 251 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 CHCHD7Q9BUK0 85 aa5.57□□□□□ -1.52
SMAD1-209ENST00000511125 TRBV25-1A0A075B6N4 114 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 TRBV6-8A0A0A6YYG3 113 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 TMEM18Q96B42 140 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 GTSF1LQ9H1H1 148 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 IGLV4-60A0A075B6I1 120 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 IGLV10-54A0A075B6I4 117 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 DAZ4Q86SG3 579 aaKnown RBP5.56□□□□□ -1.52
SMAD1-209ENST00000511125 DAZ3Q9NR90 486 aaKnown RBP5.56□□□□□ -1.52
SMAD1-209ENST00000511125 CYSLTR1Q9Y271 337 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 TRAV13-1A0A0B4J241 112 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 SCGB1D1O95968 90 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 ORMDL2Q53FV1 153 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 MPV17L2Q567V2 206 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 SPATA12Q7Z6I5 190 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 CHCHD1Q96BP2 118 aaKnown RBP5.56□□□□□ -1.52
SMAD1-209ENST00000511125 TMEM243Q9BU79 118 aa5.56□□□□□ -1.52
SMAD1-209ENST00000511125 A0A087WX48 190 aa5.55□□□□□ -1.52
SMAD1-209ENST00000511125 FGF6P10767 208 aa5.55□□□□□ -1.52
SMAD1-209ENST00000511125 CDPF1Q6NVV7 123 aa5.55□□□□□ -1.52
SMAD1-209ENST00000511125 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
SMAD1-209ENST00000511125 C3orf79P0CE67 100 aa5.55□□□□□ -1.52
SMAD1-209ENST00000511125 Q6ZUT4 128 aa5.55□□□□□ -1.52
SMAD1-209ENST00000511125 UBE2DNLQ8IWF7 75 aa5.55□□□□□ -1.52
SMAD1-209ENST00000511125 M0R2N4 97 aa5.54□□□□□ -1.52
SMAD1-209ENST00000511125 Q6ZN92 141 aa5.54□□□□□ -1.52
SMAD1-209ENST00000511125 IFI27L1Q96BM0 104 aa5.54□□□□□ -1.52
SMAD1-209ENST00000511125 LOC105371267A0A1B0GV96 52 aa5.54□□□□□ -1.52
SMAD1-209ENST00000511125 ANGP03950 147 aaKnown RBP5.54□□□□□ -1.52
SMAD1-209ENST00000511125 COA6Q5JTJ3 125 aaKnown RBP5.54□□□□□ -1.52
SMAD1-209ENST00000511125 Q9HAA7 133 aa5.54□□□□□ -1.52
SMAD1-209ENST00000511125 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
SMAD1-209ENST00000511125 KLK5Q9Y337 293 aaPredicted RBP5.54□□□□□ -1.52
SMAD1-209ENST00000511125 LINC00588Q9Y4M8 146 aa5.54□□□□□ -1.52
SMAD1-209ENST00000511125 IGHV3-64A0A075B6Q5 118 aa5.53□□□□□ -1.52
SMAD1-209ENST00000511125 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.53□□□□□ -1.52
SMAD1-209ENST00000511125 CIDEAO60543 219 aa5.53□□□□□ -1.52
SMAD1-209ENST00000511125 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
SMAD1-209ENST00000511125 LINC00269Q8N2A0 174 aa5.53□□□□□ -1.52
SMAD1-209ENST00000511125 MUC7Q8TAX7 377 aa5.53□□□□□ -1.52
SMAD1-209ENST00000511125 ESDP10768 282 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 RBX1P62877 108 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 TOMM6Q96B49 74 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 PRSS47A8MTI9 375 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 CCL18P55774 89 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 OR5A1Q8NGJ0 315 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 MAP1LC3CQ9BXW4 147 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 VCX2Q9H322 139 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms