RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 KANTRA0A1W2PQU2 76 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 XKRY2A2RUG3 117 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 SLPIP03973 132 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 TRGC1P0CF51 173 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 SULT1A2P50226 295 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 ZNF345Q14585 488 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 WDR73Q6P4I2 378 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 GNG13Q9P2W3 67 aa5.3□□□□□ -1.56
TRIO-217ENST00000511019 RAB19A4D1S5 217 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 C19orf71A6NCJ1 209 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 GAGE12HA6NDE8 117 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 HMSDA8MTL9 139 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 IFNA1P01562 189 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 CHTF8P0CG12 524 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 NTF3P20783 257 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 AMTP48728 403 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 GNG4P50150 75 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 CCL20P78556 96 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 COTL1Q14019 142 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 RGS21Q2M5E4 152 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 CENPWQ5EE01 88 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 LYZL1Q6UWQ5 148 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 C7orf33Q8WU49 177 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 C11orf52Q96A22 123 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 PGLYRP4Q96LB8 373 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 GFRA4Q9GZZ7 299 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 BIN3Q9NQY0 253 aa5.29□□□□□ -1.56
TRIO-217ENST00000511019 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 TEX46H3BTG2 121 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 BCL2L11O43521 198 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 RPS10P46783 165 aaKnown RBP5.28□□□□□ -1.56
TRIO-217ENST00000511019 COX6A2Q02221 97 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 C9orf62Q8N4C0 152 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 GTSF1Q8WW33 167 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 SMIM12Q96EX1 92 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 PLAC8Q9NZF1 115 aa5.28□□□□□ -1.56
TRIO-217ENST00000511019 TRAV1-1A0A0B4J248 108 aa5.27□□□□□ -1.57
TRIO-217ENST00000511019 IGKV3OR2-268A0A0C4DH90 116 aa5.27□□□□□ -1.57
TRIO-217ENST00000511019 PHOX2AO14813 284 aa5.27□□□□□ -1.57
TRIO-217ENST00000511019 NDUFS6O75380 124 aaKnown RBP5.27□□□□□ -1.57
TRIO-217ENST00000511019 TWIST1Q15672 202 aa5.27□□□□□ -1.57
TRIO-217ENST00000511019 AMMECR1LQ6DCA0 310 aa5.27□□□□□ -1.57
TRIO-217ENST00000511019 MED9Q9NWA0 146 aa5.27□□□□□ -1.57
TRIO-217ENST00000511019 FAT3Q8TDW7 4589 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 PDE6DO43924 150 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 MAJINQ3KP22 176 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 HIGD2BQ4VC39 106 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 EIF5AL1Q6IS14 154 aaKnown RBP5.26□□□□□ -1.57
TRIO-217ENST00000511019 C15orf56Q8N910 161 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 NUDT10Q8NFP7 164 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 PRSS3P2Q8NHM4 247 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 NUDT11Q96G61 164 aa5.26□□□□□ -1.57
TRIO-217ENST00000511019 IGKV2-24A0A0C4DH68 120 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 H7C423 109 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 NCR2O95944 276 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 MEF2BQ02080 365 aaPredicted RBP5.25□□□□□ -1.57
TRIO-217ENST00000511019 RNASEKQ6P5S7 137 aaKnown RBP5.25□□□□□ -1.57
TRIO-217ENST00000511019 SMIM15Q7Z3B0 74 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 STPG4Q8N801 248 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 GATD1Q8NB37 220 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 LYPD6BQ8NI32 183 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 CHCHD10Q8WYQ3 142 aaPredicted RBP5.25□□□□□ -1.57
TRIO-217ENST00000511019 LINC01600Q96MT4 127 aa5.25□□□□□ -1.57
TRIO-217ENST00000511019 BTF3L4Q96K17 158 aa5.24□□□□□ -1.57
TRIO-217ENST00000511019 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.23□□□□□ -1.57
TRIO-217ENST00000511019 GVQW2A0A096LPI5 108 aaPredicted RBP5.23□□□□□ -1.57
TRIO-217ENST00000511019 TRAV26-2A0A0B4J265 109 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 IGKV2-29A2NJV5 120 aaPredicted RBP5.23□□□□□ -1.57
TRIO-217ENST00000511019 APCSP02743 223 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 FGF6P10767 208 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 PMCHP20382 165 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 CTRLP40313 264 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 TEX261Q6UWH6 196 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 Q6ZNX1 250 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 OR5A1Q8NGJ0 315 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 TMEM101Q96IK0 257 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 RPP21Q9H633 154 aaKnown RBP5.23□□□□□ -1.57
TRIO-217ENST00000511019 LINC00474Q9P2X8 69 aa5.23□□□□□ -1.57
TRIO-217ENST00000511019 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 I3L3M4 83 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 ZNF25P17030 456 aaPredicted RBP5.22□□□□□ -1.57
TRIO-217ENST00000511019 TAGLN2P37802 199 aaKnown RBP5.22□□□□□ -1.57
TRIO-217ENST00000511019 PRR3P79522 188 aaKnown RBP5.22□□□□□ -1.57
TRIO-217ENST00000511019 FOXI1Q12951 378 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 SPINK6Q6UWN8 80 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 OCC1Q8TAD7 63 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 RPL39LQ96EH5 51 aaKnown RBP5.22□□□□□ -1.57
TRIO-217ENST00000511019 CNFNQ9BYD5 112 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 RNASE7Q9H1E1 156 aaKnown RBP5.22□□□□□ -1.57
TRIO-217ENST00000511019 PKIGQ9Y2B9 76 aa5.22□□□□□ -1.57
TRIO-217ENST00000511019 A0A096LNI7 61 aa5.21□□□□□ -1.58
TRIO-217ENST00000511019 IGHV1-58A0A0C4DH39 117 aa5.21□□□□□ -1.58
TRIO-217ENST00000511019 A0A0J9YXV3 536 aa5.21□□□□□ -1.58
TRIO-217ENST00000511019 LINC00959A0A1B0GUT2 108 aa5.21□□□□□ -1.58
TRIO-217ENST00000511019 SDHAF1A6NFY7 115 aa5.21□□□□□ -1.58
TRIO-217ENST00000511019 BCL2P10415 239 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms