RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CSN1S1P47710 185 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 RAB2AP61019 212 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 PKIAP61925 76 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 EIF5AP63241 154 aaKnown RBP3.27□□□□□ -1.89
USP53-206ENST00000510737 GCSAMLQ5JQS6 135 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 PFDN5Q99471 154 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 TREM1Q9NP99 234 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 IGKV2-28A0A075B6P5 120 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 DISC1C4P0D8 188 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 IGKV2D-28P01615 120 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 ANXA3P12429 323 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 RPL29P47914 159 aaKnown RBP3.26□□□□□ -1.89
USP53-206ENST00000510737 S100A10P60903 97 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 FAM74A4Q5TZK3 123 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 MIR17HGQ75NE6 70 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 MITD1Q8WV92 249 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 GGACTQ9BVM4 153 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 SLIRPQ9GZT3 109 aaKnown RBP3.26□□□□□ -1.89
USP53-206ENST00000510737 MIXL1Q9H2W2 232 aa3.26□□□□□ -1.89
USP53-206ENST00000510737 RABL2AQ9UBK7 228 aaPredicted RBP3.26□□□□□ -1.89
USP53-206ENST00000510737 FLGP20930 4061 aaPredicted RBP3.25□□□□□ -1.89
USP53-206ENST00000510737 M0R2T5 61 aa3.25□□□□□ -1.89
USP53-206ENST00000510737 SSSCA1O60232 199 aa3.25□□□□□ -1.89
USP53-206ENST00000510737 LINC00337Q8N6G1 96 aa3.25□□□□□ -1.89
USP53-206ENST00000510737 DYNC2LI1Q8TCX1 351 aa3.25□□□□□ -1.89
USP53-206ENST00000510737 SFRP2Q96HF1 295 aa3.25□□□□□ -1.89
USP53-206ENST00000510737 HYLS1Q96M11 299 aa3.25□□□□□ -1.89
USP53-206ENST00000510737 TRAV6A0A075B6T7 132 aa3.24□□□□□ -1.89
USP53-206ENST00000510737 AQP4P55087 323 aa3.24□□□□□ -1.89
USP53-206ENST00000510737 IQCJQ1A5X6 159 aa3.24□□□□□ -1.89
USP53-206ENST00000510737 CARD19Q96LW7 228 aa3.24□□□□□ -1.89
USP53-206ENST00000510737 PRRT1Q99946 306 aa3.24□□□□□ -1.89
USP53-206ENST00000510737 DERL1Q9BUN8 251 aa3.24□□□□□ -1.89
USP53-206ENST00000510737 NMES1Q9C002 83 aa3.24□□□□□ -1.89
USP53-206ENST00000510737 TRBV25-1A0A075B6N4 114 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 TRBV6-1A0A0K0K1D8 114 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 LOC107984640A0A0U1RRK4 108 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 GCGP01275 180 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 AKAIN1P0CW23 69 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 BCL2P10415 239 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 S100A4P26447 101 aaKnown RBP3.23□□□□□ -1.89
USP53-206ENST00000510737 LSM3P62310 102 aaKnown RBP3.23□□□□□ -1.89
USP53-206ENST00000510737 SYCNQ0VAF6 134 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 ZNF674Q2M3X9 581 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 KRTAP13-2Q52LG2 175 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 GOLT1AQ6ZVE7 132 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 CLVS1Q8IUQ0 354 aaPredicted RBP3.23□□□□□ -1.89
USP53-206ENST00000510737 AQP10Q96PS8 301 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 NAA50Q9GZZ1 169 aaKnown RBP3.23□□□□□ -1.89
USP53-206ENST00000510737 IL36BQ9NZH7 164 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 PKIGQ9Y2B9 76 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 PHLDA3Q9Y5J5 127 aa3.23□□□□□ -1.89
USP53-206ENST00000510737 PIGBOS1A0A0B4J2F0 54 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 C7orf66A4D0T2 115 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 FAM25AB3EWG3 89 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 FAM25CB3EWG5 89 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 FAM25GB3EWG6 89 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 ARMS2P0C7Q2 107 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 FGF6P10767 208 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 TAS2R30P59541 319 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 TMEM97Q5BJF2 176 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 TMEM128Q5BJH2 165 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 CHCHD10Q8WYQ3 142 aaPredicted RBP3.22□□□□□ -1.89
USP53-206ENST00000510737 SCGB3A2Q96PL1 93 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 OR5AC2Q9NZP5 309 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 EXTL2Q9UBQ6 330 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 BLOC1S6Q9UL45 172 aa3.22□□□□□ -1.89
USP53-206ENST00000510737 IGHV1-24A0A0C4DH33 117 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 IGKV3OR2-268A0A0C4DH90 116 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.21□□□□□ -1.9
USP53-206ENST00000510737 H3BVH4 76 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 CST7O76096 145 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 SFT2D2O95562 160 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 SULT1A2P50226 295 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 GABARAPL2P60520 117 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 RAB4BP61018 213 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 GNG5P63218 68 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 MEF2BQ02080 365 aaPredicted RBP3.21□□□□□ -1.9
USP53-206ENST00000510737 SSBP1Q04837 148 aaKnown RBP3.21□□□□□ -1.9
USP53-206ENST00000510737 SS18Q15532 418 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 TSKUQ8WUA8 353 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 CNBD2Q96M20 576 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 VCXQ9H320 206 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 WFDC1Q9HC57 220 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 OTORQ9NRC9 128 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 UQCC1Q9NVA1 299 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
USP53-206ENST00000510737 ANKRD20A5PA0PJZ0 165 aa3.2□□□□□ -1.9
USP53-206ENST00000510737 M0R381 172 aa3.2□□□□□ -1.9
USP53-206ENST00000510737 PPP1R1AQ13522 171 aa3.2□□□□□ -1.9
USP53-206ENST00000510737 EIF5AL1Q6IS14 154 aaKnown RBP3.2□□□□□ -1.9
USP53-206ENST00000510737 CMTM2Q8TAZ6 248 aa3.2□□□□□ -1.9
USP53-206ENST00000510737 LYRM2Q9NU23 88 aaPredicted RBP3.2□□□□□ -1.9
USP53-206ENST00000510737 SCP2D1Q9UJQ7 156 aa3.2□□□□□ -1.9
USP53-206ENST00000510737 IGHV1-58A0A0C4DH39 117 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 GRIFINA4D1Z8 144 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 OR7C2O60412 319 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms