RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 UBE2WQ96B02 151 aa13.17□□□□□ -0.3
FGFR4-211ENST00000509511 DNAH11Q96DT5 4516 aa13.17□□□□□ -0.3
FGFR4-211ENST00000509511 ANGP03950 147 aaKnown RBP13.16□□□□□ -0.3
FGFR4-211ENST00000509511 RPS10P46783 165 aaKnown RBP13.16□□□□□ -0.3
FGFR4-211ENST00000509511 Q0VG73 95 aa13.16□□□□□ -0.3
FGFR4-211ENST00000509511 ATRAIDQ6UW56 229 aa13.16□□□□□ -0.3
FGFR4-211ENST00000509511 DEFB104AQ8WTQ1 72 aa13.16□□□□□ -0.3
FGFR4-211ENST00000509511 COX11Q9Y6N1 276 aa13.16□□□□□ -0.3
FGFR4-211ENST00000509511 A0A087WTM6 91 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 SMKR1H3BMG3 65 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 I3L3M4 83 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 GAS8-AS1O95177 125 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 RBX1P62877 108 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 Q8N976 141 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
FGFR4-211ENST00000509511 MRPL51Q4U2R6 128 aaKnown RBP13.14□□□□□ -0.31
FGFR4-211ENST00000509511 C16orf90A8MZG2 172 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 PMCHP20382 165 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 CTDSP1Q9GZU7 261 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 IGKV2D-24A0A075B6R9 120 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 CKS2P33552 79 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 NRACQ8N912 160 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 BTF3L4Q96K17 158 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 IMMP2LQ96T52 175 aa13.13□□□□□ -0.31
FGFR4-211ENST00000509511 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
FGFR4-211ENST00000509511 TRBV27A0A0K0K1C4 114 aa13.12□□□□□ -0.31
FGFR4-211ENST00000509511 SUMO2P61956 95 aaKnown RBP13.12□□□□□ -0.31
FGFR4-211ENST00000509511 C1orf43Q9BWL3 253 aa13.12□□□□□ -0.31
FGFR4-211ENST00000509511 TMEM242Q9NWH2 141 aa13.12□□□□□ -0.31
FGFR4-211ENST00000509511 A0A1B0GUV1 79 aa13.11□□□□□ -0.31
FGFR4-211ENST00000509511 KRTAP10-2P60368 255 aa13.11□□□□□ -0.31
FGFR4-211ENST00000509511 MIAQ16674 131 aa13.11□□□□□ -0.31
FGFR4-211ENST00000509511 CARHSP1Q9Y2V2 147 aaKnown RBP13.11□□□□□ -0.31
FGFR4-211ENST00000509511 D6R8Y8 96 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 TSHBP01222 138 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 PPBPP02775 128 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
FGFR4-211ENST00000509511 AMMECR1LQ6DCA0 310 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 CDPF1Q6NVV7 123 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 CLPSL2Q6UWE3 100 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 ENHOQ6UWT2 76 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 LINC00269Q8N2A0 174 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 PRR34Q9NV39 138 aa13.1□□□□□ -0.31
FGFR4-211ENST00000509511 LRCOL1A6NCL2 159 aa13.09□□□□□ -0.31
FGFR4-211ENST00000509511 H7C423 109 aa13.09□□□□□ -0.31
FGFR4-211ENST00000509511 VCYO14598 125 aa13.09□□□□□ -0.31
FGFR4-211ENST00000509511 C10orf91Q5T1B1 145 aa13.09□□□□□ -0.31
FGFR4-211ENST00000509511 KIR2DL4Q99706 377 aa13.09□□□□□ -0.31
FGFR4-211ENST00000509511 C20orf78Q9BR46 151 aa13.09□□□□□ -0.31
FGFR4-211ENST00000509511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.08□□□□□ -0.32
FGFR4-211ENST00000509511 IGKV2-29A2NJV5 120 aaPredicted RBP13.08□□□□□ -0.32
FGFR4-211ENST00000509511 FCER1GP30273 86 aa13.08□□□□□ -0.32
FGFR4-211ENST00000509511 RHEBQ15382 184 aa13.08□□□□□ -0.32
FGFR4-211ENST00000509511 ORMDL3Q8N138 153 aa13.08□□□□□ -0.32
FGFR4-211ENST00000509511 C20orf203Q8NBC4 194 aa13.08□□□□□ -0.32
FGFR4-211ENST00000509511 TRBV24-1A0A075B6N3 115 aa13.07□□□□□ -0.32
FGFR4-211ENST00000509511 TRAV9-1A0A075B6T8 112 aa13.07□□□□□ -0.32
FGFR4-211ENST00000509511 TNFRSF6BO95407 300 aa13.07□□□□□ -0.32
FGFR4-211ENST00000509511 S100PP25815 95 aa13.07□□□□□ -0.32
FGFR4-211ENST00000509511 REG3AQ06141 175 aa13.07□□□□□ -0.32
FGFR4-211ENST00000509511 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
FGFR4-211ENST00000509511 IGLV4-60A0A075B6I1 120 aa13.06□□□□□ -0.32
FGFR4-211ENST00000509511 C7orf77A4D0Y5 90 aa13.06□□□□□ -0.32
FGFR4-211ENST00000509511 PHOX2AO14813 284 aa13.06□□□□□ -0.32
FGFR4-211ENST00000509511 ZNF25P17030 456 aaPredicted RBP13.06□□□□□ -0.32
FGFR4-211ENST00000509511 NDUFA5Q16718 116 aa13.06□□□□□ -0.32
FGFR4-211ENST00000509511 RNASEKQ6P5S7 137 aaKnown RBP13.06□□□□□ -0.32
FGFR4-211ENST00000509511 NPYP01303 97 aa13.05□□□□□ -0.32
FGFR4-211ENST00000509511 FGF6P10767 208 aa13.05□□□□□ -0.32
FGFR4-211ENST00000509511 RPL32P62910 135 aaKnown RBP13.05□□□□□ -0.32
FGFR4-211ENST00000509511 Q8N814 137 aa13.05□□□□□ -0.32
FGFR4-211ENST00000509511 SMIM2Q9BVW6 85 aa13.05□□□□□ -0.32
FGFR4-211ENST00000509511 TCAPO15273 167 aa13.04□□□□□ -0.32
FGFR4-211ENST00000509511 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
FGFR4-211ENST00000509511 ESDP10768 282 aa13.04□□□□□ -0.32
FGFR4-211ENST00000509511 CLRN3Q8NCR9 226 aa13.04□□□□□ -0.32
FGFR4-211ENST00000509511 NTN5Q8WTR8 489 aaPredicted RBP13.04□□□□□ -0.32
FGFR4-211ENST00000509511 LECT2O14960 151 aa13.03□□□□□ -0.32
FGFR4-211ENST00000509511 TMEM136Q6ZRR5 245 aa13.03□□□□□ -0.32
FGFR4-211ENST00000509511 MAPKAPK5-AS1Q8N8E1 139 aa13.03□□□□□ -0.32
FGFR4-211ENST00000509511 TMEM101Q96IK0 257 aa13.03□□□□□ -0.32
FGFR4-211ENST00000509511 PRELID3AQ96N28 172 aa13.03□□□□□ -0.32
FGFR4-211ENST00000509511 RPS10P5Q9NQ39 176 aa13.03□□□□□ -0.32
FGFR4-211ENST00000509511 LAMTOR2Q9Y2Q5 125 aa13.03□□□□□ -0.32
FGFR4-211ENST00000509511 DNAH5Q8TE73 4624 aa13.02□□□□□ -0.33
FGFR4-211ENST00000509511 TRAV8-4A0A0B4J246 113 aa13.02□□□□□ -0.33
FGFR4-211ENST00000509511 SMAGPQ0VAQ4 97 aa13.02□□□□□ -0.33
FGFR4-211ENST00000509511 WFDC2Q14508 124 aa13.02□□□□□ -0.33
FGFR4-211ENST00000509511 BAALCQ8WXS3 180 aa13.02□□□□□ -0.33
FGFR4-211ENST00000509511 IGLV5-52A0A0A0MRZ9 124 aa13.01□□□□□ -0.33
FGFR4-211ENST00000509511 APOC3P02656 99 aa13.01□□□□□ -0.33
FGFR4-211ENST00000509511 SVBPQ8N300 66 aa13.01□□□□□ -0.33
FGFR4-211ENST00000509511 OR5A1Q8NGJ0 315 aa13.01□□□□□ -0.33
FGFR4-211ENST00000509511 LRP1BQ9NZR2 4599 aa13□□□□□ -0.33
FGFR4-211ENST00000509511 IGLV10-54A0A075B6I4 117 aa13□□□□□ -0.33
FGFR4-211ENST00000509511 FUSP35637 526 aaKnown RBP eCLIP13□□□□□ -0.331e-11■■□□□ 12.4
FGFR4-211ENST00000509511 MRPL52Q86TS9 123 aaKnown RBP13□□□□□ -0.33
FGFR4-211ENST00000509511 KIAA1109Q2LD37 5005 aa13□□□□□ -0.33
FGFR4-211ENST00000509511 SNAPINO95295 136 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms