RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 A0A1B0GU33 70 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 HMSDA8MTL9 139 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 C16orf90A8MZG2 172 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 PLA2G10O15496 165 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 PSCAO43653 123 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 WISP3O95389 354 aaPredicted RBP1.35□□□□□ -2.19
PDE4D-218ENST00000509368 SFT2D2O95562 160 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 CYB5AP00167 134 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 IGKV1D-33P01593 117 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 IGKV1-33P01594 117 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 FABP2P12104 132 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF80P51504 273 aaPredicted RBP1.35□□□□□ -2.19
PDE4D-218ENST00000509368 BSPH1Q075Z2 132 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 MIC13Q5XKP0 118 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 HEPN1Q6WQI6 88 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 C7orf65Q6ZTY9 151 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 RNASE6Q93091 150 aaKnown RBP1.35□□□□□ -2.19
PDE4D-218ENST00000509368 DIRC1Q969H9 104 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 PRELID3AQ96N28 172 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 SMR3AQ99954 134 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 PLA2G12AQ9BZM1 189 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 TXNL4BQ9NX01 149 aaKnown RBP1.35□□□□□ -2.19
PDE4D-218ENST00000509368 CELA1Q9UNI1 258 aa1.35□□□□□ -2.19
PDE4D-218ENST00000509368 MAP1AP78559 2803 aaPredicted RBP1.35□□□□□ -2.19
PDE4D-218ENST00000509368 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.34□□□□□ -2.19
PDE4D-218ENST00000509368 FAM236AA0A1B0GUQ0 79 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 FAM236BA0A1B0GV22 79 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 LOC285095A0A1B0GVY8 99 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 E7EQL1 145 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 M0R233 179 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 TCL1BO95988 128 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 NPYP01303 97 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 NFYAP23511 347 aaPredicted RBP1.34□□□□□ -2.19
PDE4D-218ENST00000509368 TSPEAR-AS2P59090 65 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 NPC2P61916 151 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 DEFA5Q01523 94 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00483Q53H64 154 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 SDIM1Q6ZPB5 146 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 SBSPONQ8IVN8 264 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 DYNAPQ8N1N2 210 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 KLK12Q9UKR0 248 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 JMJD1CQ15652 2540 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 IGKV2D-24A0A075B6R9 120 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF860A6NHJ4 632 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 LYRM1O43325 122 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 SYNGR2O43760 224 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 SNCGO76070 127 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 IL5P05113 134 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 INAFM2P0DMQ5 153 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 CSN1S1P47710 185 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 FXYD7P58549 80 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 KRTDAPP60985 99 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 EIF4EBP1Q13541 118 aaPredicted RBP1.34□□□□□ -2.19
PDE4D-218ENST00000509368 ADIRFQ15847 76 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 PMCHL1Q16048 86 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 MYO7BQ6PIF6 2116 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 ZGRF1Q86YA3 2104 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 CLDND2Q8NHS1 167 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 VSTM2AQ8TAG5 236 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 TAS2R4Q9NYW5 299 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 LY96Q9Y6Y9 160 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 CUBNO60494 3623 aa1.34□□□□□ -2.19
PDE4D-218ENST00000509368 HIVEP2P31629 2446 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 KANTRA0A1W2PQU2 76 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 TMEM256-PLSCR3K7ERE1 68 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 ATOX1O00244 68 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 NDUFC1O43677 76 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 TRGV3P03979 118 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 TRGC1P0CF51 173 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 TPT1P13693 172 aaKnown RBP1.34□□□□□ -2.2
PDE4D-218ENST00000509368 SLC25A16P16260 332 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 RNASE4P34096 147 aaKnown RBP1.34□□□□□ -2.2
PDE4D-218ENST00000509368 RPL18Q07020 188 aaKnown RBP1.34□□□□□ -2.2
PDE4D-218ENST00000509368 ATP11AUNQ6ZP68 121 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 COMMD6Q7Z4G1 85 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 DCANP1Q8TF63 244 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 TSKUQ8WUA8 353 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 BRK1Q8WUW1 75 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 MGST2Q99735 147 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 IL36BQ9NZH7 164 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 RNF11Q9Y3C5 154 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 FAM215AQ9Y5M1 114 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 DNAJC15Q9Y5T4 150 aa1.34□□□□□ -2.2
PDE4D-218ENST00000509368 HRNRQ86YZ3 2850 aaPredicted RBP1.34□□□□□ -2.2
PDE4D-218ENST00000509368 CACNA1CQ13936 2221 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 DOCK10Q96BY6 2186 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 ABCA4P78363 2273 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IGKV1D-37A0A075B6S9 117 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 TRAV14DV4A0A0A6YYC5 116 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 UBE2L5PA0A1B0GUS4 154 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 TMEM235A6NFC5 223 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 CPSF4O95639 269 aaKnown RBP1.33□□□□□ -2.2
PDE4D-218ENST00000509368 CFDP00746 253 aaPredicted RBP1.33□□□□□ -2.2
PDE4D-218ENST00000509368 TCRAP04437 139 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 SLC25A5P05141 298 aaKnown RBP1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IGLC2P0DOY2 106 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IGLC3P0DOY3 106 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 CCL3P10147 92 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 UBE2L3P68036 154 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms