RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 DEFB104AQ8WTQ1 72 aa13.53□□□□□ -0.24
HOXC6-204ENST00000509328 BTF3L4Q96K17 158 aa13.53□□□□□ -0.24
HOXC6-204ENST00000509328 PKD1P98161 4303 aa13.53□□□□□ -0.24
HOXC6-204ENST00000509328 PMCHP20382 165 aa13.52□□□□□ -0.25
HOXC6-204ENST00000509328 NRACQ8N912 160 aa13.52□□□□□ -0.25
HOXC6-204ENST00000509328 TMEM70Q9BUB7 260 aa13.52□□□□□ -0.25
HOXC6-204ENST00000509328 CKS2P33552 79 aa13.51□□□□□ -0.25
HOXC6-204ENST00000509328 POLR2KP53803 58 aaKnown RBP13.51□□□□□ -0.25
HOXC6-204ENST00000509328 TRBV27A0A0K0K1C4 114 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 UBE2L6O14933 153 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 PSCAO43653 123 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 APCSP02743 223 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 ANGP03950 147 aaKnown RBP13.5□□□□□ -0.25
HOXC6-204ENST00000509328 RBX1P62877 108 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 Q8N976 141 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 TM2D2Q9BX73 214 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 TMEM242Q9NWH2 141 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 BIRC6Q9NR09 4857 aa13.5□□□□□ -0.25
HOXC6-204ENST00000509328 C7orf77A4D0Y5 90 aa13.49□□□□□ -0.25
HOXC6-204ENST00000509328 SUMO2P61956 95 aaKnown RBP13.49□□□□□ -0.25
HOXC6-204ENST00000509328 RHEBQ15382 184 aa13.49□□□□□ -0.25
HOXC6-204ENST00000509328 CLRN3Q8NCR9 226 aa13.49□□□□□ -0.25
HOXC6-204ENST00000509328 UBE2WQ96B02 151 aa13.49□□□□□ -0.25
HOXC6-204ENST00000509328 RMI2Q96E14 147 aa13.49□□□□□ -0.25
HOXC6-204ENST00000509328 TRBV24-1A0A075B6N3 115 aa13.48□□□□□ -0.25
HOXC6-204ENST00000509328 TRAV9-1A0A075B6T8 112 aa13.48□□□□□ -0.25
HOXC6-204ENST00000509328 A0A1B0GUV1 79 aa13.48□□□□□ -0.25
HOXC6-204ENST00000509328 D6R8Y8 96 aa13.48□□□□□ -0.25
HOXC6-204ENST00000509328 VCYO14598 125 aa13.48□□□□□ -0.25
HOXC6-204ENST00000509328 PPBPP02775 128 aa13.48□□□□□ -0.25
HOXC6-204ENST00000509328 Q0VG73 95 aa13.48□□□□□ -0.25
HOXC6-204ENST00000509328 EREGO14944 169 aa13.47□□□□□ -0.25
HOXC6-204ENST00000509328 TSHBP01222 138 aa13.47□□□□□ -0.25
HOXC6-204ENST00000509328 CRPP02741 224 aa13.47□□□□□ -0.25
HOXC6-204ENST00000509328 C20orf78Q9BR46 151 aa13.47□□□□□ -0.25
HOXC6-204ENST00000509328 COX11Q9Y6N1 276 aa13.47□□□□□ -0.25
HOXC6-204ENST00000509328 H7C423 109 aa13.46□□□□□ -0.25
HOXC6-204ENST00000509328 TNFRSF6BO95407 300 aa13.46□□□□□ -0.25
HOXC6-204ENST00000509328 S100PP25815 95 aa13.46□□□□□ -0.25
HOXC6-204ENST00000509328 NDUFA5Q16718 116 aa13.46□□□□□ -0.25
HOXC6-204ENST00000509328 ENHOQ6UWT2 76 aa13.46□□□□□ -0.25
HOXC6-204ENST00000509328 RPS10P5Q9NQ39 176 aa13.46□□□□□ -0.25
HOXC6-204ENST00000509328 A0A087WTM6 91 aa13.45□□□□□ -0.26
HOXC6-204ENST00000509328 PHOX2AO14813 284 aa13.45□□□□□ -0.26
HOXC6-204ENST00000509328 APOC3P02656 99 aa13.45□□□□□ -0.26
HOXC6-204ENST00000509328 ORMDL3Q8N138 153 aa13.45□□□□□ -0.26
HOXC6-204ENST00000509328 DNAH11Q96DT5 4516 aa13.45□□□□□ -0.26
HOXC6-204ENST00000509328 IGKV2D-24A0A075B6R9 120 aa13.44□□□□□ -0.26
HOXC6-204ENST00000509328 RPL32P62910 135 aaKnown RBP13.44□□□□□ -0.26
HOXC6-204ENST00000509328 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
HOXC6-204ENST00000509328 C20orf203Q8NBC4 194 aa13.44□□□□□ -0.26
HOXC6-204ENST00000509328 KIR2DL4Q99706 377 aa13.44□□□□□ -0.26
HOXC6-204ENST00000509328 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
HOXC6-204ENST00000509328 PKHD1P08F94 4074 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.43□□□□□ -0.26
HOXC6-204ENST00000509328 IGKV2-29A2NJV5 120 aaPredicted RBP13.43□□□□□ -0.26
HOXC6-204ENST00000509328 LRCOL1A6NCL2 159 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 NPYP01303 97 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 ESDP10768 282 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 MIAQ16674 131 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 LINC00269Q8N2A0 174 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 SVBPQ8N300 66 aa13.43□□□□□ -0.26
HOXC6-204ENST00000509328 IGLV4-60A0A075B6I1 120 aa13.42□□□□□ -0.26
HOXC6-204ENST00000509328 SNAPINO95295 136 aa13.42□□□□□ -0.26
HOXC6-204ENST00000509328 FCER1GP30273 86 aa13.42□□□□□ -0.26
HOXC6-204ENST00000509328 AMMECR1LQ6DCA0 310 aa13.42□□□□□ -0.26
HOXC6-204ENST00000509328 PRELID3AQ96N28 172 aa13.42□□□□□ -0.26
HOXC6-204ENST00000509328 C1orf43Q9BWL3 253 aa13.42□□□□□ -0.26
HOXC6-204ENST00000509328 REG3AQ06141 175 aa13.41□□□□□ -0.26
HOXC6-204ENST00000509328 SMIM2Q9BVW6 85 aa13.41□□□□□ -0.26
HOXC6-204ENST00000509328 LAMTOR2Q9Y2Q5 125 aa13.41□□□□□ -0.26
HOXC6-204ENST00000509328 FGF6P10767 208 aa13.4□□□□□ -0.26
HOXC6-204ENST00000509328 CLPSL2Q6UWE3 100 aa13.4□□□□□ -0.26
HOXC6-204ENST00000509328 TCAPO15273 167 aa13.39□□□□□ -0.27
HOXC6-204ENST00000509328 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
HOXC6-204ENST00000509328 KRTAP10-2P60368 255 aa13.39□□□□□ -0.27
HOXC6-204ENST00000509328 RNASEKQ6P5S7 137 aaKnown RBP13.39□□□□□ -0.27
HOXC6-204ENST00000509328 MAPKAPK5-AS1Q8N8E1 139 aa13.38□□□□□ -0.27
HOXC6-204ENST00000509328 PGPEP1Q9NXJ5 209 aa13.38□□□□□ -0.27
HOXC6-204ENST00000509328 C16orf90A8MZG2 172 aa13.37□□□□□ -0.27
HOXC6-204ENST00000509328 COX19Q49B96 90 aa13.37□□□□□ -0.27
HOXC6-204ENST00000509328 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
HOXC6-204ENST00000509328 TRAV8-4A0A0B4J246 113 aa13.36□□□□□ -0.27
HOXC6-204ENST00000509328 PRSS47A8MTI9 375 aa13.36□□□□□ -0.27
HOXC6-204ENST00000509328 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
HOXC6-204ENST00000509328 CDPF1Q6NVV7 123 aa13.36□□□□□ -0.27
HOXC6-204ENST00000509328 MRPL52Q86TS9 123 aaKnown RBP13.36□□□□□ -0.27
HOXC6-204ENST00000509328 GNB1LQ9BYB4 327 aa13.36□□□□□ -0.27
HOXC6-204ENST00000509328 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
HOXC6-204ENST00000509328 SLC7A5P1Q8MH63 180 aa13.35□□□□□ -0.27
HOXC6-204ENST00000509328 Q8N814 137 aa13.35□□□□□ -0.27
HOXC6-204ENST00000509328 OR5A1Q8NGJ0 315 aa13.35□□□□□ -0.27
HOXC6-204ENST00000509328 BAALCQ8WXS3 180 aa13.35□□□□□ -0.27
HOXC6-204ENST00000509328 MAP1LC3AQ9H492 121 aa13.35□□□□□ -0.27
HOXC6-204ENST00000509328 DYNC1H1Q14204 4646 aaKnown RBP13.35□□□□□ -0.27
HOXC6-204ENST00000509328 WFDC2Q14508 124 aa13.34□□□□□ -0.27
HOXC6-204ENST00000509328 TMEM18Q96B42 140 aa13.34□□□□□ -0.27
HOXC6-204ENST00000509328 LECT2O14960 151 aa13.33□□□□□ -0.28
HOXC6-204ENST00000509328 IGLV10-54A0A075B6I4 117 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms