RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 NIT2Q9NQR4 276 aa6.58□□□□□ -1.36
UBE2D3-227ENST00000508818 REG3AQ06141 175 aa6.57□□□□□ -1.36
UBE2D3-227ENST00000508818 COTL1Q14019 142 aa6.57□□□□□ -1.36
UBE2D3-227ENST00000508818 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
UBE2D3-227ENST00000508818 RPP21Q9H633 154 aaKnown RBP6.57□□□□□ -1.36
UBE2D3-227ENST00000508818 PRR34Q9NV39 138 aa6.57□□□□□ -1.36
UBE2D3-227ENST00000508818 TRBV20OR9-2A0A075B6H5 130 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 IGLV10-54A0A075B6I4 117 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 TRAV8-4A0A0B4J246 113 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 PRSS1P07477 247 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 AMTP48728 403 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 BLOC1S1P78537 153 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 CLRN3Q8NCR9 226 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 OCC1Q8TAD7 63 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 CIRBP-AS1Q8TBR5 109 aa6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
UBE2D3-227ENST00000508818 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
UBE2D3-227ENST00000508818 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
UBE2D3-227ENST00000508818 AKAP14Q86UN6 197 aa6.55□□□□□ -1.36
UBE2D3-227ENST00000508818 DPH3Q96FX2 82 aa6.55□□□□□ -1.36
UBE2D3-227ENST00000508818 PGLYRP4Q96LB8 373 aa6.55□□□□□ -1.36
UBE2D3-227ENST00000508818 AP5S1Q9NUS5 200 aa6.55□□□□□ -1.36
UBE2D3-227ENST00000508818 hDV102S1A0JD36 115 aa6.54□□□□□ -1.36
UBE2D3-227ENST00000508818 GATCO43716 136 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-227ENST00000508818 CTRLP40313 264 aa6.54□□□□□ -1.36
UBE2D3-227ENST00000508818 CEBPGP53567 150 aa6.54□□□□□ -1.36
UBE2D3-227ENST00000508818 AMMECR1LQ6DCA0 310 aa6.54□□□□□ -1.36
UBE2D3-227ENST00000508818 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
UBE2D3-227ENST00000508818 HERC1Q15751 4861 aa6.53□□□□□ -1.36
UBE2D3-227ENST00000508818 IGLV4-60A0A075B6I1 120 aa6.53□□□□□ -1.36
UBE2D3-227ENST00000508818 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-227ENST00000508818 TEX261Q6UWH6 196 aa6.53□□□□□ -1.36
UBE2D3-227ENST00000508818 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
UBE2D3-227ENST00000508818 BORCS7Q96B45 105 aa6.53□□□□□ -1.36
UBE2D3-227ENST00000508818 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
UBE2D3-227ENST00000508818 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 IGKV3OR2-268A0A0C4DH90 116 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 A8MWL6 223 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 KRTAP29-1A8MX34 341 aaPredicted RBP6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 K7EN84 100 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 RNASEKQ6P5S7 137 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 CFAP161Q6P656 301 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 KRTAP26-1Q6PEX3 210 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 ALKAL2Q6UX46 152 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 Q6ZNX1 250 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 GATD1Q8NB37 220 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
UBE2D3-227ENST00000508818 IGHV3-64A0A075B6Q5 118 aa6.51□□□□□ -1.37
UBE2D3-227ENST00000508818 NCR2O95944 276 aa6.51□□□□□ -1.37
UBE2D3-227ENST00000508818 PMCHP20382 165 aa6.51□□□□□ -1.37
UBE2D3-227ENST00000508818 RPL37AP61513 92 aaKnown RBP6.51□□□□□ -1.37
UBE2D3-227ENST00000508818 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
UBE2D3-227ENST00000508818 GTSF1Q8WW33 167 aa6.51□□□□□ -1.37
UBE2D3-227ENST00000508818 EIF5A2Q9GZV4 153 aaKnown RBP6.51□□□□□ -1.37
UBE2D3-227ENST00000508818 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 APCSP02743 223 aa6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 CNBPP62633 177 aaKnown RBP6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 SDIM1Q6ZPB5 146 aa6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 FAM231DQ6ZW35 169 aa6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 RPL39LQ96EH5 51 aaKnown RBP6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 BTF3L4Q96K17 158 aa6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 GFRA4Q9GZZ7 299 aa6.5□□□□□ -1.37
UBE2D3-227ENST00000508818 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
UBE2D3-227ENST00000508818 H7C423 109 aa6.49□□□□□ -1.37
UBE2D3-227ENST00000508818 I3L3M4 83 aa6.49□□□□□ -1.37
UBE2D3-227ENST00000508818 FOXA3P55318 350 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-227ENST00000508818 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
UBE2D3-227ENST00000508818 SMIM7Q9BQ49 75 aa6.49□□□□□ -1.37
UBE2D3-227ENST00000508818 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-227ENST00000508818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.48□□□□□ -1.37
UBE2D3-227ENST00000508818 IGKV2-29A2NJV5 120 aaPredicted RBP6.48□□□□□ -1.37
UBE2D3-227ENST00000508818 ZNF727A8MUV8 499 aa6.48□□□□□ -1.37
UBE2D3-227ENST00000508818 OXTP01178 125 aa6.48□□□□□ -1.37
UBE2D3-227ENST00000508818 FGF6P10767 208 aa6.48□□□□□ -1.37
UBE2D3-227ENST00000508818 CT83Q5H943 113 aa6.48□□□□□ -1.37
UBE2D3-227ENST00000508818 ST20Q9HBF5 79 aa6.48□□□□□ -1.37
UBE2D3-227ENST00000508818 A0A1B0GUT8 65 aa6.47□□□□□ -1.37
UBE2D3-227ENST00000508818 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
UBE2D3-227ENST00000508818 CHCHD10Q8WYQ3 142 aaPredicted RBP6.47□□□□□ -1.37
UBE2D3-227ENST00000508818 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 ZNF25P17030 456 aaPredicted RBP6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 RPS10P46783 165 aaKnown RBP6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 HIGD2BQ4VC39 106 aa6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 OR5A1Q8NGJ0 315 aa6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 TSKUQ8WUA8 353 aa6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 RNF185Q96GF1 192 aa6.46□□□□□ -1.38
UBE2D3-227ENST00000508818 TRBV6-5A0A0K0K1A5 114 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 FAM231BA6NCW3 169 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 PANO1I0J062 215 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 SLPIP03973 132 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 RIGQ13278 110 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 SERTAD4-AS1Q5TG53 156 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 LINC01551Q86U37 167 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 MRAP2Q96G30 205 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 FAM210AQ96ND0 272 aa6.45□□□□□ -1.38
UBE2D3-227ENST00000508818 TMEM191AQ9H0A3 160 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms