RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 A0A087WYN8 130 aa5.42□□□□□ -1.54
COL4A3BP-206ENST00000508809 PRSS2P07478 247 aa5.42□□□□□ -1.54
COL4A3BP-206ENST00000508809 CXCL1P09341 107 aa5.42□□□□□ -1.54
COL4A3BP-206ENST00000508809 IQCJQ1A5X6 159 aa5.42□□□□□ -1.54
COL4A3BP-206ENST00000508809 SPACA4Q8TDM5 124 aa5.42□□□□□ -1.54
COL4A3BP-206ENST00000508809 TCEAL7Q9BRU2 100 aa5.42□□□□□ -1.54
COL4A3BP-206ENST00000508809 KIF25-AS1Q9Y6Z4 181 aa5.42□□□□□ -1.54
COL4A3BP-206ENST00000508809 TRBV25-1A0A075B6N4 114 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 IGHV3-64A0A075B6Q5 118 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 TRAV8-4A0A0B4J246 113 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 A0A1B0GUV1 79 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 hDV102S1A0JD36 115 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 SNAI2O43623 268 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 P01737 135 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 OR5AL1P0C617 328 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 GZMBP10144 247 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 FHITP49789 147 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 REG3AQ06141 175 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 GAGE6Q13070 117 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 ZNF56Q15929 161 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 RPL7L1Q6DKI1 246 aaKnown RBP5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 PRR26Q8N8Z3 221 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 OR10AG1Q8NH19 301 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 URB1-AS1Q96HZ7 61 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 DERL1Q9BUN8 251 aa5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 ZNF471Q9BX82 626 aaPredicted RBP5.41□□□□□ -1.54
COL4A3BP-206ENST00000508809 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 CHTF8P0CG12 524 aa5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 KRTAP10-8P60410 259 aa5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 UBE2G1P62253 170 aa5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 Q5BKY6 102 aa5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 CLPSL2Q6UWE3 100 aa5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 C20orf203Q8NBC4 194 aa5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 DPH3Q96FX2 82 aa5.4□□□□□ -1.54
COL4A3BP-206ENST00000508809 MUC2Q02817 5179 aa5.39□□□□□ -1.55
COL4A3BP-206ENST00000508809 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
COL4A3BP-206ENST00000508809 IGHV1-24A0A0C4DH33 117 aa5.39□□□□□ -1.55
COL4A3BP-206ENST00000508809 PHOX2AO14813 284 aa5.39□□□□□ -1.55
COL4A3BP-206ENST00000508809 DEFA1P59665 94 aa5.39□□□□□ -1.55
COL4A3BP-206ENST00000508809 DEFA3P59666 94 aa5.39□□□□□ -1.55
COL4A3BP-206ENST00000508809 IGLV4-60A0A075B6I1 120 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 BORCS7-ASMTA0A0B4J1R7 106 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 M0QY20 66 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 S100A9P06702 114 aaKnown RBP5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 INO80EQ8NBZ0 244 aaPredicted RBP5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 OCC1Q8TAD7 63 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 GFRA4Q9GZZ7 299 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 DPH3P1Q9H4G8 78 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 ALG5Q9Y673 324 aa5.38□□□□□ -1.55
COL4A3BP-206ENST00000508809 A0A0J9YXV3 536 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 MAP1LC3B2A6NCE7 125 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 C5orf52A6NGY3 159 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 AKR1C3P42330 323 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 COX6A2Q02221 97 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 AKR1C8PQ5T2L2 129 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 SPANXN1Q5VSR9 72 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 MAP1LC3BQ9GZQ8 125 aa5.37□□□□□ -1.55
COL4A3BP-206ENST00000508809 MUC21A0A0G2JKD1 596 aa5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 MUC21A0A140T8X8 626 aa5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 NDUFS6O75380 124 aaKnown RBP5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 GIPP09681 153 aaPredicted RBP5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 SMIM17P0DL12 118 aa5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 RPS10P46783 165 aaKnown RBP5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 BAGE2Q86Y30 109 aa5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 STOML3Q8TAV4 291 aa5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 CYTL1Q9NRR1 136 aa5.36□□□□□ -1.55
COL4A3BP-206ENST00000508809 H7C1H1 209 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 RAB5CP51148 216 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 SPINK6Q6UWN8 80 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 GTSF1Q8WW33 167 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 AP1S3Q96PC3 154 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 TMEM243Q9BU79 118 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 MED28Q9H204 178 aa5.35□□□□□ -1.55
COL4A3BP-206ENST00000508809 IGLC6P0CF74 106 aa5.34□□□□□ -1.55
COL4A3BP-206ENST00000508809 SSTP61278 116 aa5.34□□□□□ -1.55
COL4A3BP-206ENST00000508809 TMUB2Q71RG4 321 aa5.34□□□□□ -1.55
COL4A3BP-206ENST00000508809 STPG4Q8N801 248 aa5.34□□□□□ -1.55
COL4A3BP-206ENST00000508809 MBD3L1Q8WWY6 194 aa5.34□□□□□ -1.55
COL4A3BP-206ENST00000508809 FXYD6-FXYD2A0A087WZ82 144 aa5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 F8WDY8 70 aa5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 G3V3Q6 166 aa5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 NKX2-5P52952 324 aaPredicted RBP5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 RASL11AQ6T310 242 aa5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 TPPP3Q9BW30 176 aa5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 NIT2Q9NQR4 276 aa5.33□□□□□ -1.56
COL4A3BP-206ENST00000508809 GVQW2A0A096LPI5 108 aaPredicted RBP5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 IGKV2-24A0A0C4DH68 120 aa5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 XKRY2A2RUG3 117 aa5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 GAS8-AS1O95177 125 aa5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 VPREB1P12018 145 aa5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 AMTP48728 403 aa5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 CACNG7P62955 275 aa5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 TMEM18Q96B42 140 aa5.32□□□□□ -1.56
COL4A3BP-206ENST00000508809 LINC00474Q9P2X8 69 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms