RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.3
SFXN1-209ENST00000508290 MRAP2Q96G30 205 aa13.15□□□□□ -0.3
SFXN1-209ENST00000508290 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
SFXN1-209ENST00000508290 DNAH5Q8TE73 4624 aa13.14□□□□□ -0.31
SFXN1-209ENST00000508290 A0A1B0GW15 77 aa13.14□□□□□ -0.31
SFXN1-209ENST00000508290 H7C423 109 aa13.14□□□□□ -0.31
SFXN1-209ENST00000508290 PPP1R17O96001 155 aa13.14□□□□□ -0.31
SFXN1-209ENST00000508290 SRSF3P84103 164 aaKnown RBP13.14□□□□□ -0.31
SFXN1-209ENST00000508290 NUP35Q8NFH5 326 aa13.14□□□□□ -0.31
SFXN1-209ENST00000508290 KRTAP10-1P60331 282 aa13.13□□□□□ -0.31
SFXN1-209ENST00000508290 Q8N1X5 172 aa13.13□□□□□ -0.31
SFXN1-209ENST00000508290 BAALCQ8WXS3 180 aa13.13□□□□□ -0.31
SFXN1-209ENST00000508290 TRAV8-4A0A0B4J246 113 aa13.12□□□□□ -0.31
SFXN1-209ENST00000508290 SMIM27A0A1W2PRY6 76 aa13.12□□□□□ -0.31
SFXN1-209ENST00000508290 SDHAF1A6NFY7 115 aa13.12□□□□□ -0.31
SFXN1-209ENST00000508290 FUSP35637 526 aaKnown RBP eCLIP13.12□□□□□ -0.31
SFXN1-209ENST00000508290 WFDC2Q14508 124 aa13.12□□□□□ -0.31
SFXN1-209ENST00000508290 LINC00269Q8N2A0 174 aa13.12□□□□□ -0.31
SFXN1-209ENST00000508290 I3L3M4 83 aa13.11□□□□□ -0.31
SFXN1-209ENST00000508290 APCSP02743 223 aa13.11□□□□□ -0.31
SFXN1-209ENST00000508290 REG3AQ06141 175 aa13.11□□□□□ -0.31
SFXN1-209ENST00000508290 RPL39LQ96EH5 51 aaKnown RBP13.11□□□□□ -0.31
SFXN1-209ENST00000508290 LECT2O14960 151 aa13.1□□□□□ -0.31
SFXN1-209ENST00000508290 S100A8P05109 93 aa13.1□□□□□ -0.31
SFXN1-209ENST00000508290 RAB4AP20338 218 aa13.1□□□□□ -0.31
SFXN1-209ENST00000508290 ST20Q9HBF5 79 aa13.1□□□□□ -0.31
SFXN1-209ENST00000508290 PCLOQ9Y6V0 5065 aa13.09□□□□□ -0.31
SFXN1-209ENST00000508290 PNRC1Q12796 327 aaPredicted RBP13.09□□□□□ -0.31
SFXN1-209ENST00000508290 HSPG2P98160 4391 aa13.08□□□□□ -0.32
SFXN1-209ENST00000508290 PPP1R2P9O14990 202 aa13.08□□□□□ -0.32
SFXN1-209ENST00000508290 PMCHP20382 165 aa13.08□□□□□ -0.32
SFXN1-209ENST00000508290 C20orf203Q8NBC4 194 aa13.08□□□□□ -0.32
SFXN1-209ENST00000508290 RNF185Q96GF1 192 aa13.08□□□□□ -0.32
SFXN1-209ENST00000508290 APOBP04114 4563 aaKnown RBP13.07□□□□□ -0.32
SFXN1-209ENST00000508290 ZNF25P17030 456 aaPredicted RBP13.07□□□□□ -0.32
SFXN1-209ENST00000508290 AMMECR1LQ6DCA0 310 aa13.07□□□□□ -0.32
SFXN1-209ENST00000508290 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
SFXN1-209ENST00000508290 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.06□□□□□ -0.32
SFXN1-209ENST00000508290 TRBV27A0A0K0K1C4 114 aa13.06□□□□□ -0.32
SFXN1-209ENST00000508290 LINC00862A6NCI5 91 aa13.06□□□□□ -0.32
SFXN1-209ENST00000508290 XGP55808 180 aa13.06□□□□□ -0.32
SFXN1-209ENST00000508290 CLLU1Q5K131 121 aa13.06□□□□□ -0.32
SFXN1-209ENST00000508290 IGLV4-60A0A075B6I1 120 aa13.05□□□□□ -0.32
SFXN1-209ENST00000508290 HLA-DQA1P01909 254 aa13.05□□□□□ -0.32
SFXN1-209ENST00000508290 CLPSL2Q6UWE3 100 aa13.05□□□□□ -0.32
SFXN1-209ENST00000508290 F8W036 122 aa13.04□□□□□ -0.32
SFXN1-209ENST00000508290 POLR2KP53803 58 aaKnown RBP13.04□□□□□ -0.32
SFXN1-209ENST00000508290 FAM104BQ5XKR9 115 aa13.04□□□□□ -0.32
SFXN1-209ENST00000508290 USP17L23D6RBM5 183 aa13.03□□□□□ -0.32
SFXN1-209ENST00000508290 VCYO14598 125 aa13.03□□□□□ -0.32
SFXN1-209ENST00000508290 HBBP68871 147 aa13.03□□□□□ -0.32
SFXN1-209ENST00000508290 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
SFXN1-209ENST00000508290 ATP5L2Q7Z4Y8 100 aa13.03□□□□□ -0.32
SFXN1-209ENST00000508290 CLRN3Q8NCR9 226 aa13.03□□□□□ -0.32
SFXN1-209ENST00000508290 BTF3L4Q96K17 158 aa13.03□□□□□ -0.32
SFXN1-209ENST00000508290 FGF6P10767 208 aa13.02□□□□□ -0.33
SFXN1-209ENST00000508290 CAMPP49913 170 aa13.02□□□□□ -0.33
SFXN1-209ENST00000508290 DGAT2L7PQ6IED9 249 aa13.02□□□□□ -0.33
SFXN1-209ENST00000508290 KRTAP26-1Q6PEX3 210 aa13.02□□□□□ -0.33
SFXN1-209ENST00000508290 TMEM101Q96IK0 257 aa13.02□□□□□ -0.33
SFXN1-209ENST00000508290 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 TCAPO15273 167 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 TSHBP01222 138 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 MT-ND4LP03901 98 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 ESDP10768 282 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
SFXN1-209ENST00000508290 SUMO2P61956 95 aaKnown RBP13.01□□□□□ -0.33
SFXN1-209ENST00000508290 RNASEKQ6P5S7 137 aaKnown RBP13.01□□□□□ -0.33
SFXN1-209ENST00000508290 Q6ZSA8 131 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 DEFB104AQ8WTQ1 72 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 ANAPC16Q96DE5 110 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 KIR2DL4Q99706 377 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 C20orf78Q9BR46 151 aa13.01□□□□□ -0.33
SFXN1-209ENST00000508290 IGLV10-54A0A075B6I4 117 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 TRBV24-1A0A075B6N3 115 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.99□□□□□ -0.33
SFXN1-209ENST00000508290 A0A1B0GXF2 115 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 IGKV2-29A2NJV5 120 aaPredicted RBP12.99□□□□□ -0.33
SFXN1-209ENST00000508290 GAS8-AS1O95177 125 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 PPBPP02775 128 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 FCER1GP30273 86 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 RPL32P62910 135 aaKnown RBP12.99□□□□□ -0.33
SFXN1-209ENST00000508290 MRPL51Q4U2R6 128 aaKnown RBP12.99□□□□□ -0.33
SFXN1-209ENST00000508290 UQCC3Q6UW78 93 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 MRPL52Q86TS9 123 aaKnown RBP12.99□□□□□ -0.33
SFXN1-209ENST00000508290 NRACQ8N912 160 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 TMEM242Q9NWH2 141 aa12.99□□□□□ -0.33
SFXN1-209ENST00000508290 C7orf77A4D0Y5 90 aa12.98□□□□□ -0.33
SFXN1-209ENST00000508290 CKS2P33552 79 aa12.98□□□□□ -0.33
SFXN1-209ENST00000508290 OR5A1Q8NGJ0 315 aa12.98□□□□□ -0.33
SFXN1-209ENST00000508290 KRTAP4-5Q9BYR2 181 aa12.98□□□□□ -0.33
SFXN1-209ENST00000508290 PHOX2AO14813 284 aa12.97□□□□□ -0.33
SFXN1-209ENST00000508290 MRPL54Q6P161 138 aaKnown RBP12.97□□□□□ -0.33
SFXN1-209ENST00000508290 CFAP161Q6P656 301 aa12.97□□□□□ -0.33
SFXN1-209ENST00000508290 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
SFXN1-209ENST00000508290 FAM229AH3BQW9 127 aa12.96□□□□□ -0.33
SFXN1-209ENST00000508290 TMEM18Q96B42 140 aa12.96□□□□□ -0.33
SFXN1-209ENST00000508290 PRSS1P07477 247 aa12.95□□□□□ -0.34
SFXN1-209ENST00000508290 CSDC2Q9Y534 153 aaKnown RBP12.95□□□□□ -0.34
SFXN1-209ENST00000508290 AP5S1Q9NUS5 200 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms