RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 Q9HAA7 133 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 KLK12Q9UKR0 248 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 TRBV27A0A0K0K1C4 114 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 C7orf77A4D0Y5 90 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 EREGO14944 169 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 APCSP02743 223 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 RPS10P46783 165 aaKnown RBP10.08□□□□□ -0.8
RNF4-210ENST00000508235 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
RNF4-210ENST00000508235 GAGE6Q13070 117 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 ATRAIDQ6UW56 229 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
RNF4-210ENST00000508235 DNAH6Q9C0G6 4158 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 A0A1B0GVY2 172 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 SMKR1H3BMG3 65 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 H7C423 109 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 VCYO14598 125 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 PHOX2AO14813 284 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 CRPP02741 224 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 ANGP03950 147 aaKnown RBP10.07□□□□□ -0.8
RNF4-210ENST00000508235 POLR2KP53803 58 aaKnown RBP10.07□□□□□ -0.8
RNF4-210ENST00000508235 SVBPQ8N300 66 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 NRACQ8N912 160 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 RPS10P5Q9NQ39 176 aa10.07□□□□□ -0.8
RNF4-210ENST00000508235 TRBV24-1A0A075B6N3 115 aa10.06□□□□□ -0.8
RNF4-210ENST00000508235 A0A1B0GUV1 79 aa10.06□□□□□ -0.8
RNF4-210ENST00000508235 D6R8Y8 96 aa10.06□□□□□ -0.8
RNF4-210ENST00000508235 RBX1P62877 108 aa10.06□□□□□ -0.8
RNF4-210ENST00000508235 ORMDL3Q8N138 153 aa10.06□□□□□ -0.8
RNF4-210ENST00000508235 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
RNF4-210ENST00000508235 SNAPINO95295 136 aa10.05□□□□□ -0.8
RNF4-210ENST00000508235 APOC3P02656 99 aa10.05□□□□□ -0.8
RNF4-210ENST00000508235 Q8N976 141 aa10.05□□□□□ -0.8
RNF4-210ENST00000508235 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
RNF4-210ENST00000508235 UBE2WQ96B02 151 aa10.05□□□□□ -0.8
RNF4-210ENST00000508235 TCAPO15273 167 aa10.04□□□□□ -0.8
RNF4-210ENST00000508235 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
RNF4-210ENST00000508235 TSHBP01222 138 aa10.04□□□□□ -0.8
RNF4-210ENST00000508235 FCER1GP30273 86 aa10.04□□□□□ -0.8
RNF4-210ENST00000508235 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
RNF4-210ENST00000508235 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
RNF4-210ENST00000508235 LAMTOR2Q9Y2Q5 125 aa10.04□□□□□ -0.8
RNF4-210ENST00000508235 MIAQ16674 131 aa10.03□□□□□ -0.8
RNF4-210ENST00000508235 COX19Q49B96 90 aa10.03□□□□□ -0.8
RNF4-210ENST00000508235 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
RNF4-210ENST00000508235 PRELID3AQ96N28 172 aa10.03□□□□□ -0.8
RNF4-210ENST00000508235 IGKV2D-24A0A075B6R9 120 aa10.02□□□□□ -0.81
RNF4-210ENST00000508235 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
RNF4-210ENST00000508235 SMAGPQ0VAQ4 97 aa10.02□□□□□ -0.81
RNF4-210ENST00000508235 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.81
RNF4-210ENST00000508235 C1orf43Q9BWL3 253 aa10.02□□□□□ -0.81
RNF4-210ENST00000508235 PRR34Q9NV39 138 aa10.02□□□□□ -0.81
RNF4-210ENST00000508235 A0A087WTM6 91 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 NPYP01303 97 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 HLA-DQA1P01909 254 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 ESDP10768 282 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 ENHOQ6UWT2 76 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 TMEM18Q96B42 140 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
RNF4-210ENST00000508235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
RNF4-210ENST00000508235 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
RNF4-210ENST00000508235 FGF6P10767 208 aa10□□□□□ -0.81
RNF4-210ENST00000508235 REG3AQ06141 175 aa10□□□□□ -0.81
RNF4-210ENST00000508235 RNASEKQ6P5S7 137 aaKnown RBP10□□□□□ -0.81
RNF4-210ENST00000508235 TMEM101Q96IK0 257 aa10□□□□□ -0.81
RNF4-210ENST00000508235 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
RNF4-210ENST00000508235 TRAV8-4A0A0B4J246 113 aa9.99□□□□□ -0.81
RNF4-210ENST00000508235 SPATA12Q7Z6I5 190 aa9.99□□□□□ -0.81
RNF4-210ENST00000508235 GNB1LQ9BYB4 327 aa9.99□□□□□ -0.81
RNF4-210ENST00000508235 MAP1LC3AQ9H492 121 aa9.99□□□□□ -0.81
RNF4-210ENST00000508235 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
RNF4-210ENST00000508235 LRCOL1A6NCL2 159 aa9.98□□□□□ -0.81
RNF4-210ENST00000508235 PRSS47A8MTI9 375 aa9.98□□□□□ -0.81
RNF4-210ENST00000508235 MT-ND6P03923 174 aa9.98□□□□□ -0.81
RNF4-210ENST00000508235 RAB5AP20339 215 aa9.98□□□□□ -0.81
RNF4-210ENST00000508235 CDPF1Q6NVV7 123 aa9.98□□□□□ -0.81
RNF4-210ENST00000508235 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
RNF4-210ENST00000508235 MRPL52Q86TS9 123 aaKnown RBP9.98□□□□□ -0.81
RNF4-210ENST00000508235 OR5A1Q8NGJ0 315 aa9.97□□□□□ -0.81
RNF4-210ENST00000508235 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
RNF4-210ENST00000508235 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.82
RNF4-210ENST00000508235 SLC7A5P1Q8MH63 180 aa9.96□□□□□ -0.82
RNF4-210ENST00000508235 CSDC2Q9Y534 153 aaKnown RBP9.96□□□□□ -0.82
RNF4-210ENST00000508235 Q8N814 137 aa9.95□□□□□ -0.82
RNF4-210ENST00000508235 NTN5Q8WTR8 489 aaPredicted RBP9.95□□□□□ -0.82
RNF4-210ENST00000508235 K7EMI3 77 aa9.94□□□□□ -0.82
RNF4-210ENST00000508235 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
RNF4-210ENST00000508235 MAPKAPK5-AS1Q8N8E1 139 aa9.94□□□□□ -0.82
RNF4-210ENST00000508235 BAALCQ8WXS3 180 aa9.94□□□□□ -0.82
RNF4-210ENST00000508235 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
RNF4-210ENST00000508235 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
RNF4-210ENST00000508235 TGIF2-C20orf24A0A0A6YYL0 155 aa9.93□□□□□ -0.82
RNF4-210ENST00000508235 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
RNF4-210ENST00000508235 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
RNF4-210ENST00000508235 C14orf177Q52M58 125 aa9.93□□□□□ -0.82
RNF4-210ENST00000508235 Q8N8P6 123 aa9.93□□□□□ -0.82
RNF4-210ENST00000508235 UBE2D4Q9Y2X8 147 aa9.93□□□□□ -0.82
RNF4-210ENST00000508235 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms