RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 SIRPDQ9H106 197 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 IGLV5-52A0A0A0MRZ9 124 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 TRBV10-1A0A0K0K1A3 114 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 Q8N1Y9 231 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 SDK2Q58EX2 2172 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 TCL1BO95988 128 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 FAM167A-AS1Q96KT0 104 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 KIAA1549LQ6ZVL6 1849 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 A4D1N5 150 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 USP17L23D6RBM5 183 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 TEN1Q86WV5 123 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 ZNF106Q9H2Y7 1883 aaKnown RBP6.1□□□□□ -1.43
PDE6A-202ENST00000508173 IGLV11-55A0A075B6I3 123 aa6.09□□□□□ -1.43
PDE6A-202ENST00000508173 E7EUB6 86 aa6.09□□□□□ -1.43
PDE6A-202ENST00000508173 LINC00482Q8N8I6 264 aa6.09□□□□□ -1.43
PDE6A-202ENST00000508173 RETNQ9HD89 108 aa6.09□□□□□ -1.43
PDE6A-202ENST00000508173 FER1L5A0AVI2 2057 aa6.09□□□□□ -1.43
PDE6A-202ENST00000508173 IGLV2-8P01709 118 aa6.09□□□□□ -1.43
PDE6A-202ENST00000508173 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.09□□□□□ -1.43
PDE6A-202ENST00000508173 PTPRSQ13332 1948 aa6.09□□□□□ -1.43
PDE6A-202ENST00000508173 TRBV12-3P01733 135 aa6.09□□□□□ -1.44
PDE6A-202ENST00000508173 RPL39P62891 51 aaKnown RBP6.09□□□□□ -1.44
PDE6A-202ENST00000508173 KRTAP27-1Q3LI81 207 aa6.09□□□□□ -1.44
PDE6A-202ENST00000508173 Q6ZSV7 163 aa6.09□□□□□ -1.44
PDE6A-202ENST00000508173 LINC00337Q8N6G1 96 aa6.09□□□□□ -1.44
PDE6A-202ENST00000508173 SONP18583 2426 aaKnown RBP6.09□□□□□ -1.44
PDE6A-202ENST00000508173 LINC00269Q8N2A0 174 aa6.08□□□□□ -1.44
PDE6A-202ENST00000508173 C1orf134Q5TEV5 83 aa6.08□□□□□ -1.44
PDE6A-202ENST00000508173 SPINK6Q6UWN8 80 aa6.08□□□□□ -1.44
PDE6A-202ENST00000508173 HEATR1Q9H583 2144 aaKnown RBP6.08□□□□□ -1.44
PDE6A-202ENST00000508173 CACNA1DQ01668 2161 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 LGALS9O00182 355 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 SYCNQ0VAF6 134 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 TNRC6BQ9UPQ9 1833 aaKnown RBP6.07□□□□□ -1.44
PDE6A-202ENST00000508173 ZNF462Q96JM2 2506 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 CRIP3Q6Q6R5 217 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 LOC107984640A0A0U1RRK4 108 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 JMJD7-PLA2G4BH0Y9G9 81 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 PDE6GP18545 87 aa6.07□□□□□ -1.44
PDE6A-202ENST00000508173 NDUFV3P56181 108 aaKnown RBP6.07□□□□□ -1.44
PDE6A-202ENST00000508173 PRAC2D3DTV9 90 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 HIGD1BQ9P298 99 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 DOCK7Q96N67 2140 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 PRYO14603 147 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 MIAQ16674 131 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 TNRC6AQ8NDV7 1962 aaKnown RBP6.06□□□□□ -1.44
PDE6A-202ENST00000508173 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 DEFB114Q30KQ6 69 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 CHCHD10Q8WYQ3 142 aaPredicted RBP6.06□□□□□ -1.44
PDE6A-202ENST00000508173 CCDC168Q8NDH2 2452 aa6.06□□□□□ -1.44
PDE6A-202ENST00000508173 A0A0J9YX75 114 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 TEX49A0A1B0GTD5 131 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 A0A0J9YWU9 116 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 VPREB1P12018 145 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 RPL28P46779 137 aaKnown RBP6.05□□□□□ -1.44
PDE6A-202ENST00000508173 KPRPQ5T749 579 aaPredicted RBP6.05□□□□□ -1.44
PDE6A-202ENST00000508173 MYO18BQ8IUG5 2567 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 TRBV6-1A0A0K0K1D8 114 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 I3L2K1 104 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 NDUFA7O95182 113 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 ACYP1P07311 99 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 DEFB1P60022 68 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 MAPKAPK5-AS1Q8N8E1 139 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 A0A0B4J2C4 111 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 ODF3BA8MYP8 253 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 H7C423 109 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 Q8N7P7 452 aa6.05□□□□□ -1.44
PDE6A-202ENST00000508173 A0A1B0GXF2 115 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 PLAC8L1A1L4L8 177 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 LY6LH3BQJ8 138 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 J3QL48 77 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 LECT2O14960 151 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 TMEM131Q92545 1883 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 C19orf71A6NCJ1 209 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 TMEM256-PLSCR3K7ERE1 68 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 LMO4P61968 165 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 C2orf91Q6ZV80 131 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 FASNP49327 2511 aaKnown RBP6.04□□□□□ -1.44
PDE6A-202ENST00000508173 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 K7EIM0 57 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 Q6ZSR3 168 aa6.04□□□□□ -1.44
PDE6A-202ENST00000508173 CRYGBP07316 175 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 ZFAND2AQ8N6M9 145 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 LINC01006Q8NI28 216 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 CEP192Q8TEP8 1941 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 C11orf86A6NJI1 115 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 FAM229AH3BQW9 127 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 PSMB8P28062 276 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 BRWD1-AS2P59051 145 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 OXLD1Q5BKU9 147 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 COL5A1P20908 1838 aaPredicted RBP6.03□□□□□ -1.44
PDE6A-202ENST00000508173 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 C1orf229Q6ZS94 237 aaPredicted RBP6.03□□□□□ -1.44
PDE6A-202ENST00000508173 PKD1L2Q7Z442 2459 aa6.03□□□□□ -1.44
PDE6A-202ENST00000508173 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms