RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LAMA1P25391 3075 aa5.02□□□□□ -1.61
PDGFRA-206ENST00000508170 ARID1BQ8NFD5 2236 aaPredicted RBP5.02□□□□□ -1.61
PDGFRA-206ENST00000508170 C16orf90A8MZG2 172 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 NDUFC1O43677 76 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 PRB4P10163 310 aaPredicted RBP5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 COL5A1P20908 1838 aaPredicted RBP5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 A8MUU9 505 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 C17orf98A8MV24 154 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 H7BZZ5 65 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 CRPP02741 224 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 FXYD4P59646 89 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 DYNAPQ8N1N2 210 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 MUC7Q8TAX7 377 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 LINC01560Q8TB33 94 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 ASXL3Q9C0F0 2248 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 CPAMD8Q8IZJ3 1885 aa5.01□□□□□ -1.61
PDGFRA-206ENST00000508170 UNC13CQ8NB66 2214 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 DMDP11532 3685 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 ZNF22P17026 224 aaPredicted RBP5□□□□□ -1.61
PDGFRA-206ENST00000508170 NHP2Q9NX24 153 aaKnown RBP5□□□□□ -1.61
PDGFRA-206ENST00000508170 ZDBF2Q9HCK1 2354 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 FRYLO94915 3013 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 IGKV1OR2-108A0A075B7D4 117 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 TCRBV4S1A1TA0A5B7 111 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 CEBPZOSA8MTT3 80 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 Q6ZQT0 140 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 Q6ZS52 159 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 C14orf178Q8N769 122 aaPredicted RBP5□□□□□ -1.61
PDGFRA-206ENST00000508170 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
PDGFRA-206ENST00000508170 CABIN1Q9Y6J0 2220 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 TRAV13-2A0A0B4J235 113 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 CD24P25063 80 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 MYO15AQ9UKN7 3530 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 IGLV1-44P01699 117 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 ACYP1P07311 99 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 C6orf201Q7Z4U5 140 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 C16orf74Q96GX8 76 aa4.99□□□□□ -1.61
PDGFRA-206ENST00000508170 SPAG17Q6Q759 2223 aa4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 IGKV1D-37A0A075B6S9 117 aa4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 TRAV7A0A075B6U4 112 aa4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 GIG44P09565 113 aaPredicted RBP4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 DEFB133Q30KQ1 61 aa4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 TIMM9Q9Y5J7 89 aa4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 BDP1A6H8Y1 2624 aa4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 EXPH5Q8NEV8 1989 aa4.98□□□□□ -1.61
PDGFRA-206ENST00000508170 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 IGHV3-64DA0A0J9YX35 117 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 C15orf32Q32M92 178 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 C9orf116Q5BN46 136 aaPredicted RBP4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 LINC00643Q86TS7 51 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 DEFB119Q8N690 84 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 C9orf106Q8NAJ2 232 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 TRAPPC1Q9Y5R8 145 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 SMAD5-AS1Q9Y6J3 95 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 ABCA7Q8IZY2 2146 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 NCOR1O75376 2440 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 ZNF56Q15929 161 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 FAM27BQ5VT28 67 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 RPL36ALQ969Q0 106 aaKnown RBP4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 ZNRD1Q9P1U0 126 aa4.97□□□□□ -1.61
PDGFRA-206ENST00000508170 ASCC3Q8N3C0 2202 aaKnown RBP4.96□□□□□ -1.61
PDGFRA-206ENST00000508170 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 FXYD2P54710 66 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 FAM223AQ8IWN6 122 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 MANBALQ9NQG1 85 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 SDK1Q7Z5N4 2213 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 SPEGQ15772 3267 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 TRBV10-2A0A0K0K1G8 114 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 HCG22E2RYF7 251 aa4.96□□□□□ -1.62
PDGFRA-206ENST00000508170 KMT2BQ9UMN6 2715 aaPredicted RBP4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 SETXQ7Z333 2677 aaKnown RBP4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 ARHGAP21Q5T5U3 1957 aa4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 CEP192Q8TEP8 1941 aa4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 ADAMTS9Q9P2N4 1935 aa4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 DSCR4P56555 118 aaPredicted RBP4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 TMEM170BQ5T4T1 132 aa4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 BPESC1Q9GZL8 116 aa4.95□□□□□ -1.62
PDGFRA-206ENST00000508170 NCOA6Q14686 2063 aaPredicted RBP4.94□□□□□ -1.62
PDGFRA-206ENST00000508170 COX8AP10176 69 aa4.94□□□□□ -1.62
PDGFRA-206ENST00000508170 Q1RN00 199 aa4.94□□□□□ -1.62
PDGFRA-206ENST00000508170 LHFPL6Q9Y693 200 aa4.94□□□□□ -1.62
PDGFRA-206ENST00000508170 CACNA1EQ15878 2313 aa4.94□□□□□ -1.62
PDGFRA-206ENST00000508170 RTTNQ86VV8 2226 aa4.94□□□□□ -1.62
PDGFRA-206ENST00000508170 IGLV3-32A0A0A0MS00 114 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 H7C2G1 150 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 C3orf79P0CE67 100 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 MGST1P10620 155 aaKnown RBP4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 KLKP1Q107X0 134 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 BAGE3Q86Y29 109 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 BAGE2Q86Y30 109 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 LITAFQ99732 161 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 FAM103A1Q9BTL3 118 aaKnown RBP4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 PPYP01298 95 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 RPL36AP83881 106 aaKnown RBP4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 MED12Q93074 2177 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 MYO7BQ6PIF6 2116 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 EPG5Q9HCE0 2579 aa4.93□□□□□ -1.62
PDGFRA-206ENST00000508170 H3BPC8 53 aa4.92□□□□□ -1.62
PDGFRA-206ENST00000508170 CRIP3Q6Q6R5 217 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms