RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
SNCAIP-209ENST00000508017 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
SNCAIP-209ENST00000508017 IGHV4-59P01825 116 aa9.82□□□□□ -0.84
SNCAIP-209ENST00000508017 NDUFA12Q9UI09 145 aa9.82□□□□□ -0.84
SNCAIP-209ENST00000508017 PYGO1Q9Y3Y4 419 aa9.82□□□□□ -0.84
SNCAIP-209ENST00000508017 ICOSQ9Y6W8 199 aa9.82□□□□□ -0.84
SNCAIP-209ENST00000508017 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
SNCAIP-209ENST00000508017 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
SNCAIP-209ENST00000508017 MSMBP08118 114 aa9.81□□□□□ -0.84
SNCAIP-209ENST00000508017 Q6ZSN1 163 aa9.81□□□□□ -0.84
SNCAIP-209ENST00000508017 CCL19Q99731 98 aa9.81□□□□□ -0.84
SNCAIP-209ENST00000508017 SNCGO76070 127 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 GNLYP22749 145 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 CLEC2BQ92478 149 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 IGKV2-29A2NJV5 120 aaPredicted RBP9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 H3BMM0 161 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 H7C423 109 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 RPL13AP40429 203 aaKnown RBP9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 UBE2WQ96B02 151 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 GAGE2DQ9UEU5 116 aa9.8□□□□□ -0.84
SNCAIP-209ENST00000508017 FLNCQ14315 2725 aa9.79□□□□□ -0.84
SNCAIP-209ENST00000508017 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
SNCAIP-209ENST00000508017 MIAQ16674 131 aa9.79□□□□□ -0.84
SNCAIP-209ENST00000508017 C2orf82Q6UX34 121 aa9.79□□□□□ -0.84
SNCAIP-209ENST00000508017 SPANXDQ9BXN6 97 aa9.79□□□□□ -0.84
SNCAIP-209ENST00000508017 SPANXCQ9NY87 97 aa9.79□□□□□ -0.84
SNCAIP-209ENST00000508017 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
SNCAIP-209ENST00000508017 ATP5J2P56134 94 aa9.78□□□□□ -0.84
SNCAIP-209ENST00000508017 DAND5Q8N907 189 aa9.78□□□□□ -0.84
SNCAIP-209ENST00000508017 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
SNCAIP-209ENST00000508017 CHCHD7Q9BUK0 85 aa9.78□□□□□ -0.84
SNCAIP-209ENST00000508017 SS18L2Q9UHA2 77 aa9.78□□□□□ -0.84
SNCAIP-209ENST00000508017 MXRA5Q9NR99 2828 aa9.78□□□□□ -0.84
SNCAIP-209ENST00000508017 DEFB112Q30KQ8 113 aa9.78□□□□□ -0.84
SNCAIP-209ENST00000508017 IGHV3-38A0A0C4DH36 116 aa9.77□□□□□ -0.84
SNCAIP-209ENST00000508017 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.84
SNCAIP-209ENST00000508017 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
SNCAIP-209ENST00000508017 NDUFV3P56181 108 aaKnown RBP9.77□□□□□ -0.85
SNCAIP-209ENST00000508017 C15orf53Q8NAA6 179 aa9.77□□□□□ -0.85
SNCAIP-209ENST00000508017 LINC00467Q9BRT7 94 aa9.77□□□□□ -0.85
SNCAIP-209ENST00000508017 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
SNCAIP-209ENST00000508017 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 RBMY1BA6NDE4 496 aaKnown RBP9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 RBMY1EA6NEQ0 496 aaKnown RBP9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 B5MCH6 92 aa9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 RBMY1DP0C7P1 496 aaKnown RBP9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 HOXD3P31249 432 aaPredicted RBP9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 GAGE5Q13069 117 aa9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 GAGE6Q13070 117 aa9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
SNCAIP-209ENST00000508017 DEFB131AP59861 70 aa9.75□□□□□ -0.85
SNCAIP-209ENST00000508017 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
SNCAIP-209ENST00000508017 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
SNCAIP-209ENST00000508017 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
SNCAIP-209ENST00000508017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.74□□□□□ -0.85
SNCAIP-209ENST00000508017 CDKN2A-AS1Q9UH64 79 aa9.74□□□□□ -0.85
SNCAIP-209ENST00000508017 USP9YO00507 2555 aaPredicted RBP9.74□□□□□ -0.85
SNCAIP-209ENST00000508017 CCDC179H3BU77 68 aa9.74□□□□□ -0.85
SNCAIP-209ENST00000508017 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
SNCAIP-209ENST00000508017 LST1O00453 97 aa9.73□□□□□ -0.85
SNCAIP-209ENST00000508017 COX6CP09669 75 aa9.73□□□□□ -0.85
SNCAIP-209ENST00000508017 DEFB136Q30KP8 78 aa9.73□□□□□ -0.85
SNCAIP-209ENST00000508017 C18orf65Q6ZTR6 163 aa9.73□□□□□ -0.85
SNCAIP-209ENST00000508017 H3BT86 120 aa9.73□□□□□ -0.85
SNCAIP-209ENST00000508017 IFITM1P13164 125 aa9.73□□□□□ -0.85
SNCAIP-209ENST00000508017 B4DSR2 109 aa9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 SLURP1P55000 103 aa9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 NRGNQ92686 78 aa9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 CUBNO60494 3623 aa9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 COX6A2Q02221 97 aa9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 TMEM101Q96IK0 257 aa9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
SNCAIP-209ENST00000508017 USP9XQ93008 2570 aaPredicted RBP9.71□□□□□ -0.85
SNCAIP-209ENST00000508017 A0A0U1RRA0 63 aa9.71□□□□□ -0.85
SNCAIP-209ENST00000508017 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
SNCAIP-209ENST00000508017 YAE1D1Q9NRH1 226 aa9.71□□□□□ -0.85
SNCAIP-209ENST00000508017 ZNF415Q09FC8 603 aa9.71□□□□□ -0.86
SNCAIP-209ENST00000508017 Q6Q795 121 aa9.71□□□□□ -0.86
SNCAIP-209ENST00000508017 ZNF625Q96I27 306 aaPredicted RBP9.71□□□□□ -0.86
SNCAIP-209ENST00000508017 POLQO75417 2590 aa9.7□□□□□ -0.86
SNCAIP-209ENST00000508017 NDUFA1O15239 70 aa9.7□□□□□ -0.86
SNCAIP-209ENST00000508017 MAPK1IP1LQ8NDC0 245 aa9.7□□□□□ -0.86
SNCAIP-209ENST00000508017 CENPEQ02224 2701 aa9.69□□□□□ -0.86
SNCAIP-209ENST00000508017 TIMM17BO60830 172 aa9.69□□□□□ -0.86
SNCAIP-209ENST00000508017 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 GAGE7O76087 117 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 IGHV3-53P01767 116 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 GAGE4Q13068 117 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 HIST2H2BDQ6DRA6 164 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 C11orf72Q8NBR9 251 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 IGHV3OR16-12A0A075B7B8 117 aa9.68□□□□□ -0.86
SNCAIP-209ENST00000508017 A8MTW9 85 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms