RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 ARHGAP5-AS1Q96IT6 56 aa2.33□□□□□ -2.04
CCDC30-212ENST00000507855 GOLGB1Q14789 3259 aaKnown RBP2.33□□□□□ -2.04
CCDC30-212ENST00000507855 C3orf84H3BNL1 204 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 H7C2G1 150 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 HMGN4O00479 90 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 BCE1O60756 84 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 IGHV3-13P01766 116 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 BGLAPP02818 100 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 COX6B1P14854 86 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 S100A4P26447 101 aaKnown RBP2.32□□□□□ -2.04
CCDC30-212ENST00000507855 LINC01590Q5TEZ4 76 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 CUL9Q8IWT3 2517 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 IGHV3-20A0A0C4DH32 117 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 A0A0J9YY99 117 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 IAPPP10997 89 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 Q8NBF4 154 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 C1orf147Q96MC9 270 aaPredicted RBP2.32□□□□□ -2.04
CCDC30-212ENST00000507855 LINC00846Q9NV44 126 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 COL5A1P20908 1838 aaPredicted RBP2.32□□□□□ -2.04
CCDC30-212ENST00000507855 KNTC1P50748 2209 aa2.32□□□□□ -2.04
CCDC30-212ENST00000507855 UTRNP46939 3433 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 SRRM5B3KS81 715 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 NTN3O00634 580 aaPredicted RBP2.31□□□□□ -2.04
CCDC30-212ENST00000507855 LY6HO94772 140 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 MOBPQ13875 183 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 SCXQ7RTU7 201 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 ARFGEF3Q5TH69 2177 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 IGHV3OR16-13A0A075B7E8 117 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 IGLV1-51P01701 117 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 FXYD4P59646 89 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 Q8IYB0 196 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 C14orf178Q8N769 122 aaPredicted RBP2.31□□□□□ -2.04
CCDC30-212ENST00000507855 WFDC9Q8NEX5 89 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 TMEM14BQ9NUH8 114 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 U3KQK5 164 aa2.31□□□□□ -2.04
CCDC30-212ENST00000507855 TNCP24821 2201 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 SRCAPQ6ZRS2 3230 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 IGHV3-38A0A0C4DH36 116 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 C19orf84I3L1E1 186 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 CGB3P0DN86 165 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 CGB7P0DN87 165 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 SPANXN5Q5MJ07 72 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 LINC00242Q5T6M2 205 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 C20orf203Q8NBC4 194 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 MAPK1IP1LQ8NDC0 245 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 KLHL30-AS1Q8NEE0 82 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 FDCSPQ8NFU4 85 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 ANKRD17O75179 2603 aaKnown RBP2.3□□□□□ -2.04
CCDC30-212ENST00000507855 IGLV7-46A0A075B6I9 117 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 TRBV7-4A0A0J9YYF1 115 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 CHKB-CPT1BH3BT56 60 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 SOCS3O14543 225 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 NDUFA3O95167 84 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 LHBP01229 141 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 IGKV1-39P01597 117 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 IGKV1D-39P04432 117 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 CCL5P13501 91 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 KRTAP10-6P60371 365 aaPredicted RBP2.3□□□□□ -2.04
CCDC30-212ENST00000507855 CXCL17Q6UXB2 119 aa2.3□□□□□ -2.04
CCDC30-212ENST00000507855 LINC00322Q6ZN03 302 aaPredicted RBP2.3□□□□□ -2.04
CCDC30-212ENST00000507855 COL4A4P53420 1690 aaPredicted RBP2.29□□□□□ -2.04
CCDC30-212ENST00000507855 TRAV10A0A0B4J240 114 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 LINC01546A6NGU7 62 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 RPS27P42677 84 aaKnown RBP2.29□□□□□ -2.04
CCDC30-212ENST00000507855 EDDM3BP56851 147 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 LPAL2Q16609 132 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 HCP5Q6MZN7 132 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 RETNLBQ9BQ08 111 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 SMAD5-AS1Q9Y6J3 95 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 UNC13CQ8NB66 2214 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 ZNF32P17041 273 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 PLNP26678 52 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 Q1RN00 199 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 C9orf116Q5BN46 136 aaPredicted RBP2.29□□□□□ -2.04
CCDC30-212ENST00000507855 ZNF826PQ6ZT77 177 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 Q8N814 137 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 DYNLRB2Q8TF09 96 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 IMMP1LQ96LU5 166 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 CCL28Q9NRJ3 127 aa2.29□□□□□ -2.04
CCDC30-212ENST00000507855 MUC22E2RYF6 1773 aaPredicted RBP2.28□□□□□ -2.04
CCDC30-212ENST00000507855 D6R8Y8 96 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 RPP21Q9H633 154 aaKnown RBP2.28□□□□□ -2.04
CCDC30-212ENST00000507855 KIF25-AS1Q9Y6Z4 181 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 MALRD1Q5VYJ5 2156 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 I3L3M4 83 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 PSCAO43653 123 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 IGLV3-19P01714 112 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 MT3P25713 68 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 C1orf134Q5TEV5 83 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 ENHOQ6UWT2 76 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 AMELXQ99217 191 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 CDC42SE1Q9NRR8 79 aa2.28□□□□□ -2.04
CCDC30-212ENST00000507855 SORL1Q92673 2214 aa2.27□□□□□ -2.05
CCDC30-212ENST00000507855 IGHV3-16A0A0C4DH30 117 aa2.27□□□□□ -2.05
CCDC30-212ENST00000507855 IGKV1-6A0A0C4DH72 117 aa2.27□□□□□ -2.05
CCDC30-212ENST00000507855 RPL37AP8A6NKH3 93 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms