RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 TEX29Q8N6K0 151 aa11.02□□□□□ -0.65
HERC6-206ENST00000506714 TRBV10-2A0A0K0K1G8 114 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 TINCRA0A1B0GVN0 87 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 AVPP01185 164 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 RPL13AP40429 203 aaKnown RBP11.01□□□□□ -0.65
HERC6-206ENST00000506714 RNF183Q96D59 192 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 SPANXA1Q9NS26 97 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 ZFHX3Q15911 3703 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 FAM104AQ969W3 186 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 NDUFA12Q9UI09 145 aa11.01□□□□□ -0.65
HERC6-206ENST00000506714 IGHV4-59P01825 116 aa11□□□□□ -0.65
HERC6-206ENST00000506714 PRSS2P07478 247 aa11□□□□□ -0.65
HERC6-206ENST00000506714 COX6CP09669 75 aa11□□□□□ -0.65
HERC6-206ENST00000506714 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
HERC6-206ENST00000506714 DOPEY2Q9Y3R5 2298 aa11□□□□□ -0.65
HERC6-206ENST00000506714 TRIAP1O43715 76 aa11□□□□□ -0.65
HERC6-206ENST00000506714 C10orf99Q6UWK7 81 aa11□□□□□ -0.65
HERC6-206ENST00000506714 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
HERC6-206ENST00000506714 CITED1Q99966 193 aa11□□□□□ -0.65
HERC6-206ENST00000506714 YAE1D1Q9NRH1 226 aa11□□□□□ -0.65
HERC6-206ENST00000506714 PTPN13Q12923 2485 aa10.99□□□□□ -0.65
HERC6-206ENST00000506714 ELANEP08246 267 aa10.99□□□□□ -0.65
HERC6-206ENST00000506714 DSCR9P59020 149 aa10.99□□□□□ -0.65
HERC6-206ENST00000506714 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
HERC6-206ENST00000506714 Q5PR19 223 aa10.99□□□□□ -0.65
HERC6-206ENST00000506714 POLQO75417 2590 aa10.99□□□□□ -0.65
HERC6-206ENST00000506714 TRAV8-3A0A0A6YYJ7 113 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 MIAQ16674 131 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 DEFB112Q30KQ8 113 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 FBN2P35556 2912 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 CSMD2Q7Z408 3487 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 A8MTW9 85 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 ADARB2-AS1A8MUL3 147 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 ANAPC13Q9BS18 74 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 ICOSQ9Y6W8 199 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 VPS13CQ709C8 3753 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 MAP1AP78559 2803 aaPredicted RBP10.98□□□□□ -0.65
HERC6-206ENST00000506714 CELSR2Q9HCU4 2923 aa10.98□□□□□ -0.65
HERC6-206ENST00000506714 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 TIMM17BO60830 172 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 SNCGO76070 127 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 RBMY1A1P0DJD3 496 aaKnown RBP10.97□□□□□ -0.65
HERC6-206ENST00000506714 RBMY1CP0DJD4 496 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 HOXD3P31249 432 aaPredicted RBP10.97□□□□□ -0.65
HERC6-206ENST00000506714 RBMY1FQ15415 496 aaKnown RBP10.97□□□□□ -0.65
HERC6-206ENST00000506714 UBE2E2Q96LR5 201 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 BEX4Q9NWD9 120 aaPredicted RBP10.97□□□□□ -0.65
HERC6-206ENST00000506714 NACAE9PAV3 2078 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 IFITM1P13164 125 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 PLA2G2AP14555 144 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 ZNF415Q09FC8 603 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 DNAJC30Q96LL9 226 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 UBE2D4Q9Y2X8 147 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 ABCA12Q86UK0 2595 aa10.97□□□□□ -0.65
HERC6-206ENST00000506714 HTN1P15515 57 aa10.96□□□□□ -0.65
HERC6-206ENST00000506714 ADAMTSL4-AS1Q5T5F5 129 aa10.96□□□□□ -0.65
HERC6-206ENST00000506714 CEMP1Q6PRD7 247 aaPredicted RBP10.96□□□□□ -0.65
HERC6-206ENST00000506714 DUX3Q96PT4 197 aa10.96□□□□□ -0.65
HERC6-206ENST00000506714 H3BMM0 161 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 H3BT86 120 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 J3QKU1 62 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 PROK1P58294 105 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 GAGE2BQ13066 116 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 GAGE2EQ4V326 116 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 UBE2WQ96B02 151 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 GAGE2DQ9UEU5 116 aa10.96□□□□□ -0.66
HERC6-206ENST00000506714 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.95□□□□□ -0.66
HERC6-206ENST00000506714 TENM4Q6N022 2769 aa10.95□□□□□ -0.66
HERC6-206ENST00000506714 TRAV8-4A0A0B4J246 113 aa10.95□□□□□ -0.66
HERC6-206ENST00000506714 KRTAP10-9P60411 292 aa10.95□□□□□ -0.66
HERC6-206ENST00000506714 C2orf82Q6UX34 121 aa10.95□□□□□ -0.66
HERC6-206ENST00000506714 DUX5Q96PT3 197 aa10.95□□□□□ -0.66
HERC6-206ENST00000506714 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
HERC6-206ENST00000506714 TEX49A0A1B0GTD5 131 aa10.94□□□□□ -0.66
HERC6-206ENST00000506714 DEFB131AP59861 70 aa10.94□□□□□ -0.66
HERC6-206ENST00000506714 Q6Q795 121 aa10.94□□□□□ -0.66
HERC6-206ENST00000506714 LINC01356Q8N9X3 169 aa10.94□□□□□ -0.66
HERC6-206ENST00000506714 SORL1Q92673 2214 aa10.94□□□□□ -0.66
HERC6-206ENST00000506714 J3QLI3 93 aa10.93□□□□□ -0.66
HERC6-206ENST00000506714 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
HERC6-206ENST00000506714 H7C423 109 aa10.93□□□□□ -0.66
HERC6-206ENST00000506714 TIRAPP58753 221 aa10.93□□□□□ -0.66
HERC6-206ENST00000506714 TMEM61Q8N0U2 210 aa10.93□□□□□ -0.66
HERC6-206ENST00000506714 IGHV3-53P01767 116 aa10.92□□□□□ -0.66
HERC6-206ENST00000506714 LINC00467Q9BRT7 94 aa10.92□□□□□ -0.66
HERC6-206ENST00000506714 VPREB3Q9UKI3 123 aa10.92□□□□□ -0.66
HERC6-206ENST00000506714 NAV2Q8IVL1 2488 aa10.92□□□□□ -0.66
HERC6-206ENST00000506714 CELSR1Q9NYQ6 3014 aa10.92□□□□□ -0.66
HERC6-206ENST00000506714 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
HERC6-206ENST00000506714 LST1O00453 97 aa10.91□□□□□ -0.66
HERC6-206ENST00000506714 NDUFA1O15239 70 aa10.91□□□□□ -0.66
HERC6-206ENST00000506714 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
HERC6-206ENST00000506714 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.91□□□□□ -0.66
HERC6-206ENST00000506714 IGLV5-45A0A087WSX0 123 aa10.91□□□□□ -0.66
HERC6-206ENST00000506714 IGKV2-29A2NJV5 120 aaPredicted RBP10.91□□□□□ -0.66
HERC6-206ENST00000506714 DEFB113Q30KQ7 82 aa10.91□□□□□ -0.66
HERC6-206ENST00000506714 Q6ZSN1 163 aa10.91□□□□□ -0.66
HERC6-206ENST00000506714 GAGE5Q13069 117 aa10.9□□□□□ -0.66
HERC6-206ENST00000506714 GAGE6Q13070 117 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms