RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TMEM242Q9NWH2 141 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 SCP2D1Q9UJQ7 156 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 V9GYV3 84 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 TNCP24821 2201 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 KIAA0100Q14667 2235 aaKnown RBP0.27□□□□□ -2.37
GYPB-207ENST00000506679 SOGA1O94964 1423 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 MGAM2Q2M2H8 2515 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 TENM2Q9NT68 2774 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 OTOGQ6ZRI0 2925 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 CELSR1Q9NYQ6 3014 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 NBPF19A0A087WUL8 3843 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 TRBV7-1A0A0A6YYK4 115 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 M0R129 80 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 PITX3O75364 302 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 NDUFB6O95139 128 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 APODP05090 189 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 IL5P05113 134 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 CBLN1P23435 193 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 CCDC58Q4VC31 144 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 COPS9Q8WXC6 57 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 SPTSSAQ969W0 71 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 MYOM3Q5VTT5 1437 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 GRIN2AQ12879 1464 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 ARFGEF1Q9Y6D6 1849 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 MED13LQ71F56 2210 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 ABCA1O95477 2261 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 PRRC2CQ9Y520 2896 aaKnown RBP0.26□□□□□ -2.37
GYPB-207ENST00000506679 ASPMQ8IZT6 3477 aa0.26□□□□□ -2.37
GYPB-207ENST00000506679 TLN2Q9Y4G6 2542 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 SIPA1L3O60292 1781 aaPredicted RBP0.25□□□□□ -2.37
GYPB-207ENST00000506679 NWD2Q9ULI1 1742 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 UNC13BO14795 1591 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 HMGXB3Q12766 1538 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 A0A087WTM6 91 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 PIGBOS1A0A0B4J2F0 54 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 SNCGO76070 127 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 HMGN1P05114 100 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 ARPC4P59998 168 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 SELENOWP63302 87 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 ZNF818PQ6ZRF7 136 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 SDF2Q99470 211 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 TGP01266 2768 aa0.25□□□□□ -2.37
GYPB-207ENST00000506679 CFAP46Q8IYW2 2715 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 LRRC37A3O60309 1634 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 GVQW2A0A096LPI5 108 aaPredicted RBP0.24□□□□□ -2.37
GYPB-207ENST00000506679 FAM92AA1XBS5 289 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 UBE2D1P51668 147 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 UBE2G1P62253 170 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 DPH3Q96FX2 82 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 PROK2Q9HC23 129 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 DSPP15924 2871 aaKnown RBP0.24□□□□□ -2.37
GYPB-207ENST00000506679 MYH7P12883 1935 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 BRCA2P51587 3418 aa0.24□□□□□ -2.37
GYPB-207ENST00000506679 BICRAQ9NZM4 1560 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 ZNF518AQ6AHZ1 1483 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 MYH8P13535 1937 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 USP34Q70CQ2 3546 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 TRBV10-3A0A0K0K1G6 114 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 APOC4-APOC2K7ER74 178 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 ACYP2P14621 99 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 EDDM3BP56851 147 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 CCL8P80075 99 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 C10orf82Q8WW14 230 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 ARL11Q969Q4 196 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 Q96NJ1 140 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 TSC22D3Q99576 134 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 SPTAN1Q13813 2472 aaKnown RBP0.23□□□□□ -2.37
GYPB-207ENST00000506679 FAM186AA6NE01 2351 aa0.23□□□□□ -2.37
GYPB-207ENST00000506679 CACNA1EQ15878 2313 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 IFT140Q96RY7 1462 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 NAIPQ13075 1403 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 F5P12259 2224 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 IBTKQ9P2D0 1353 aaPredicted RBP0.22□□□□□ -2.37
GYPB-207ENST00000506679 DOCK11Q5JSL3 2073 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 TMEM14DPA8MWL7 114 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 NDUFA2O43678 99 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 SMIM6P0DI80 62 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 COX6A2Q02221 97 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 INSL4Q14641 139 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 Q5VV11 94 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 C12orf73Q69YU5 71 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 C1orf54Q8WWF1 131 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 SNRNP25Q9BV90 132 aaKnown RBP0.22□□□□□ -2.37
GYPB-207ENST00000506679 LINC00470Q9BZP3 86 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 RERGLQ9H628 205 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 SSC5DA1L4H1 1573 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 NBEAQ8NFP9 2946 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 IGF2RP11717 2491 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 CFTRP13569 1480 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 PXDNQ92626 1479 aa0.22□□□□□ -2.37
GYPB-207ENST00000506679 CNOT1A5YKK6 2376 aaKnown RBP0.21□□□□□ -2.38
GYPB-207ENST00000506679 SPTBN5Q9NRC6 3674 aaKnown RBP0.21□□□□□ -2.38
GYPB-207ENST00000506679 TRGV1A0A0A0MS02 117 aa0.21□□□□□ -2.38
GYPB-207ENST00000506679 GCHFRP30047 84 aa0.21□□□□□ -2.38
GYPB-207ENST00000506679 Q6ZRX8 168 aa0.21□□□□□ -2.38
GYPB-207ENST00000506679 SPTSSBQ8NFR3 76 aa0.21□□□□□ -2.38
GYPB-207ENST00000506679 WFDC6Q9BQY6 131 aa0.21□□□□□ -2.38
GYPB-207ENST00000506679 PDCD10Q9BUL8 212 aa0.21□□□□□ -2.38
GYPB-207ENST00000506679 SEC11CQ9BY50 192 aa0.21□□□□□ -2.38
GYPB-207ENST00000506679 FOCADQ5VW36 1801 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms