RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 IGHV3-30-3P0DP02 117 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 IGHV3-30-5P0DP03 117 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 PTTG1IPP53801 180 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 PKIAP61925 76 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 ELOBQ15370 118 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 TMEM191AQ9H0A3 160 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 FAT2Q9NYQ8 4349 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 TRBV25-1A0A075B6N4 114 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 TRAV8-3A0A0A6YYJ7 113 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 F8W036 122 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 MT-ND4LP03901 98 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 S100A8P05109 93 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 LAGE3Q14657 143 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 GATD1Q8NB37 220 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 CHCHD7Q9BUK0 85 aa4.91□□□□□ -1.62
GYPB-206ENST00000506516 IGHV1-24A0A0C4DH33 117 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 TMEM218A2RU14 115 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 PSCAO43653 123 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 PPP1R17O96001 155 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 RAB4AP20338 218 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 COTL1Q14019 142 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 NIT1Q86X76 327 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 MRAP2Q96G30 205 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 CHCHD5Q9BSY4 110 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 TM2D2Q9BX73 214 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
GYPB-206ENST00000506516 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 TRAV26-2A0A0B4J265 109 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 PMCHP20382 165 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 CAMPP49913 170 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 IQCJQ1A5X6 159 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 NTM-AS1Q6ZSK4 140 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 COMMD7Q86VX2 200 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 AMN1Q8IY45 258 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 RMI2Q96E14 147 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 COX11Q9Y6N1 276 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 PKD1P98161 4303 aa4.89□□□□□ -1.63
GYPB-206ENST00000506516 TRBV6-5A0A0K0K1A5 114 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 A0A1B0GVY2 172 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 LINC00862A6NCI5 91 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 GAGE12HA6NDE8 117 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 I3L3M4 83 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 UBE2L6O14933 153 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 NCR2O95944 276 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 AMTP48728 403 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 HBBP68871 147 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 Q0VG73 95 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 FAM104BQ5XKR9 115 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 MRPL54Q6P161 138 aaKnown RBP4.88□□□□□ -1.63
GYPB-206ENST00000506516 ATRAIDQ6UW56 229 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 Q6ZRN7 208 aaPredicted RBP4.88□□□□□ -1.63
GYPB-206ENST00000506516 ATP5L2Q7Z4Y8 100 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 RPL39LQ96EH5 51 aaKnown RBP4.88□□□□□ -1.63
GYPB-206ENST00000506516 RNF185Q96GF1 192 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 TMEM243Q9BU79 118 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 SEC11CQ9BY50 192 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 Q9HAA7 133 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 KLK12Q9UKR0 248 aa4.88□□□□□ -1.63
GYPB-206ENST00000506516 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 VCYO14598 125 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 CRPP02741 224 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 ANGP03950 147 aaKnown RBP4.87□□□□□ -1.63
GYPB-206ENST00000506516 CKS2P33552 79 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 GAGE6Q13070 117 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 UBE2WQ96B02 151 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 BTF3L4Q96K17 158 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 IMMP2LQ96T52 175 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
GYPB-206ENST00000506516 DNAH11Q96DT5 4516 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 A0A1B0GUV1 79 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 H7C423 109 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 APCSP02743 223 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 RBX1P62877 108 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 MRPL51Q4U2R6 128 aaKnown RBP4.86□□□□□ -1.63
GYPB-206ENST00000506516 MPV17L2Q567V2 206 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 SPATA12Q7Z6I5 190 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 Q8N976 141 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
GYPB-206ENST00000506516 TRBV24-1A0A075B6N3 115 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 IGKV2D-24A0A075B6R9 120 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 A0A087WTM6 91 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 TRBV27A0A0K0K1C4 114 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 A0A1B0GXF2 115 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 C16orf90A8MZG2 172 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 SMKR1H3BMG3 65 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 GAS8-AS1O95177 125 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 PPBPP02775 128 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 ADCYAP1P18509 176 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 S100PP25815 95 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 RPS10P46783 165 aaKnown RBP4.85□□□□□ -1.63
GYPB-206ENST00000506516 POLR2KP53803 58 aaKnown RBP4.85□□□□□ -1.63
GYPB-206ENST00000506516 SUMO2P61956 95 aaKnown RBP4.85□□□□□ -1.63
GYPB-206ENST00000506516 MIAQ16674 131 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 AMMECR1LQ6DCA0 310 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 LINC00269Q8N2A0 174 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 DEFB104AQ8WTQ1 72 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 KIR2DL4Q99706 377 aa4.85□□□□□ -1.63
GYPB-206ENST00000506516 C20orf78Q9BR46 151 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms