RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NDUFA12Q9UI09 145 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 WDR7Q9Y4E6 1490 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 COL12A1Q99715 3063 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 DOCK2Q92608 1830 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 MUC12Q9UKN1 5478 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 TOP2BQ02880 1626 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 CC2D2AQ9P2K1 1620 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 TGP01266 2768 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 TRAV12-2A0A075B6T6 113 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 TEX49A0A1B0GTD5 131 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 TCRBV3S1A0A5B6 114 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 FAM92AA1XBS5 289 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 FAM25AB3EWG3 89 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 FAM25CB3EWG5 89 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 FAM25GB3EWG6 89 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 K7EIL1 84 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 FXYD1O00168 92 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 APOC1P02654 83 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 APODP05090 189 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 IL5P05113 134 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 PIRTP0C851 137 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 OR2T2Q6IF00 324 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 SLC48A1Q6P1K1 146 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 C10orf99Q6UWK7 81 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 KCNRGQ8N5I3 272 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 IFI27L1Q96BM0 104 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 DPH3Q96FX2 82 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 LINC00208Q96KT6 92 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 PDCD10Q9BUL8 212 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 TMEM242Q9NWH2 141 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 CSMD2Q7Z408 3487 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 PRUNE2Q8WUY3 3088 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 PRRC2CQ9Y520 2896 aaKnown RBP0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 DOCK1Q14185 1865 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 RBBP6Q7Z6E9 1792 aaKnown RBP0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 STAB2Q8WWQ8 2551 aa0.5□□□□□ -2.33
TOPBP1-204ENST00000505804 RIMS1Q86UR5 1692 aaKnown RBP0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 SHROOM2Q13796 1616 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 CICQ96RK0 1608 aaPredicted RBP0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 VPS13AQ96RL7 3174 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 NAIPQ13075 1403 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 ROCK2O75116 1388 aaKnown RBP0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 TCHHQ07283 1943 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 A0A1B0GV90 55 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 PIPP12273 146 aaPredicted RBP0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 NPC2P61916 151 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 KLKP1Q107X0 134 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 CYP2G1PQ6ZSU1 146 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 TSKUQ8WUA8 353 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 SPTSSAQ969W0 71 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 SNRNP25Q9BV90 132 aaKnown RBP0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 PRO3102Q9H379 93 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 TANC1Q9C0D5 1861 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 RIF1Q5UIP0 2472 aaKnown RBP0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 ACANP16112 2415 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 SPAG17Q6Q759 2223 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 VPS13CQ709C8 3753 aa0.49□□□□□ -2.33
TOPBP1-204ENST00000505804 ZNF518AQ6AHZ1 1483 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 USH2AO75445 5202 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 ABCA4P78363 2273 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 ITPR2Q14571 2701 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 KIAA0100Q14667 2235 aaKnown RBP0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 PRDM2Q13029 1718 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 ARAP2Q8WZ64 1704 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 TRAV12-3A0A0B4J271 114 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 DLEU1O43261 78 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 NDUFB6O95139 128 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 HIST1H1DP16402 221 aaKnown RBP0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 FGF7P21781 194 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 SPINT3P49223 89 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 BTG2P78543 158 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 ZNF56Q15929 161 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 C9orf116Q5BN46 136 aaPredicted RBP0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 C10orf82Q8WW14 230 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 COPS9Q8WXC6 57 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 PLAC4Q8WY50 150 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 TMEM141Q96I45 108 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 RERGLQ9H628 205 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 ROBO1Q9Y6N7 1651 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 OTOGQ6ZRI0 2925 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 LRRC37A3O60309 1634 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 DMBT1Q9UGM3 2413 aaPredicted RBP0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 KMT2AQ03164 3969 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 CACNA1HO95180 2353 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 WNK1Q9H4A3 2382 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 LRRC7Q96NW7 1537 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 FAM135AQ9P2D6 1515 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 A2ML1A8K2U0 1454 aa0.48□□□□□ -2.33
TOPBP1-204ENST00000505804 SMG6Q86US8 1419 aaKnown RBP0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 FREM2Q5SZK8 3169 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 ZZEF1O43149 2961 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 LOC100130705A0A1B0GUX0 176 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 SNCGO76070 127 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 LY6G6CO95867 125 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 CCL3L1P16619 93 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 UBE2D1P51668 147 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms