RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 C15orf56Q8N910 161 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 DIRAS2Q96HU8 199 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 SPANXB1Q9NS25 103 aaPredicted RBP4.21□□□□□ -1.74
VCAN-206ENST00000505615 C9orf170A2RU37 121 aa4.2□□□□□ -1.74
VCAN-206ENST00000505615 TMEM238C9JI98 176 aa4.2□□□□□ -1.74
VCAN-206ENST00000505615 PTTG1O95997 202 aa4.2□□□□□ -1.74
VCAN-206ENST00000505615 GCGP01275 180 aa4.2□□□□□ -1.74
VCAN-206ENST00000505615 PVALBP20472 110 aaPredicted RBP4.2□□□□□ -1.74
VCAN-206ENST00000505615 FGF7P21781 194 aa4.2□□□□□ -1.74
VCAN-206ENST00000505615 IAH1Q2TAA2 248 aaPredicted RBP4.2□□□□□ -1.74
VCAN-206ENST00000505615 SMIM15Q7Z3B0 74 aa4.2□□□□□ -1.74
VCAN-206ENST00000505615 MCFD2Q8NI22 146 aa4.2□□□□□ -1.74
VCAN-206ENST00000505615 SLIRPQ9GZT3 109 aaKnown RBP4.2□□□□□ -1.74
VCAN-206ENST00000505615 TRBV7-3A0A075B6L6 115 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 TRBV10-1A0A0K0K1A3 114 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 RGS5O15539 181 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 SSNA1O43805 119 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 OR7C2O60412 319 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 RPS10P46783 165 aaKnown RBP4.19□□□□□ -1.74
VCAN-206ENST00000505615 UBE2L3P68036 154 aaKnown RBP4.19□□□□□ -1.74
VCAN-206ENST00000505615 RPL36AP83881 106 aaKnown RBP4.19□□□□□ -1.74
VCAN-206ENST00000505615 NTM-AS1Q6ZSK4 140 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 OR10G8Q8NGN5 311 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 RPL36ALQ969Q0 106 aaKnown RBP4.19□□□□□ -1.74
VCAN-206ENST00000505615 HYLS1Q96M11 299 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 SLC25A21Q9BQT8 299 aaPredicted RBP4.19□□□□□ -1.74
VCAN-206ENST00000505615 CHCHD5Q9BSY4 110 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 NPCDR1Q9BY65 106 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 GFRA4Q9GZZ7 299 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 Q9H521 79 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 OTORQ9NRC9 128 aa4.19□□□□□ -1.74
VCAN-206ENST00000505615 IGKV3D-20A0A0C4DH25 116 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 IGSF23A1L1A6 192 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 ATP6V1G2O95670 118 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 IFNA7P01567 189 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 KRTAP1-4P0C5Y4 121 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 S100A10P60903 97 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 RAB4BP61018 213 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 PKIAP61925 76 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 GNG5P63218 68 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 FAM74A4Q5TZK3 123 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 BATF3Q9NR55 127 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 GSKIPQ9P0R6 139 aa4.18□□□□□ -1.74
VCAN-206ENST00000505615 IGLV1-50A0A075B6I6 118 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 IGLV5-39A0A0G2JS06 123 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 SMKR1H3BMG3 65 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 FAUP35544 74 aaKnown RBP4.17□□□□□ -1.74
VCAN-206ENST00000505615 REG3AQ06141 175 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 HIGD2BQ4VC39 106 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 C20orf203Q8NBC4 194 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 NMES1Q9C002 83 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 IL36BQ9NZH7 164 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 OR5AC2Q9NZP5 309 aa4.17□□□□□ -1.74
VCAN-206ENST00000505615 A0A087WXM4 84 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 H3BVH4 76 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 P01737 135 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 RAB5AP20339 215 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 S100A11P31949 105 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 SULT1A1P50225 295 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 C10orf25Q5T742 122 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 TMEM252Q8N6L7 170 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 OR2D3Q8NGH3 330 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 CMTM2Q8TAZ6 248 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 SFRP2Q96HF1 295 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 FAM218AQ96MZ4 157 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 RBM38Q9H0Z9 239 aaKnown RBP4.16□□□□□ -1.74
VCAN-206ENST00000505615 LYRM2Q9NU23 88 aaPredicted RBP4.16□□□□□ -1.74
VCAN-206ENST00000505615 LINC00474Q9P2X8 69 aa4.16□□□□□ -1.74
VCAN-206ENST00000505615 RSL24D1Q9UHA3 163 aaKnown RBP4.16□□□□□ -1.74
VCAN-206ENST00000505615 LSM5Q9Y4Y9 91 aaKnown RBP4.16□□□□□ -1.74
VCAN-206ENST00000505615 IGLV4-60A0A075B6I1 120 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 H0Y9J4 135 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 EIF3GO75821 320 aaKnown RBP eCLIP4.15□□□□□ -1.75
VCAN-206ENST00000505615 GZMBP10144 247 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 S100A4P26447 101 aaKnown RBP4.15□□□□□ -1.75
VCAN-206ENST00000505615 RAB5CP51148 216 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 CD164Q04900 197 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 FAM19A1Q7Z5A9 133 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.15□□□□□ -1.75
VCAN-206ENST00000505615 FER1L6-AS1Q8NA97 138 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 DIRC1Q969H9 104 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 NDFIP1Q9BT67 221 aa4.15□□□□□ -1.75
VCAN-206ENST00000505615 GVQW2A0A096LPI5 108 aaPredicted RBP4.14□□□□□ -1.75
VCAN-206ENST00000505615 A0A1B0GWB2 263 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 A0A1W2PNN7 141 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 TSHBP01222 138 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 HBG1P69891 147 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 HBG2P69892 147 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 SPCS2Q15005 226 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 IQCJQ1A5X6 159 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 KHDC3LQ587J8 217 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 DNLZQ5SXM8 178 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 TOMM5Q8N4H5 51 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 PSG8Q9UQ74 426 aa4.14□□□□□ -1.75
VCAN-206ENST00000505615 TRBV6-1A0A0K0K1D8 114 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 NDUFB6O95139 128 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 MT-ND6P03923 174 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 IGLV7-43P04211 117 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms