RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 POLR2KP53803 58 aaKnown RBP7.1□□□□□ -1.27
RFC1-210ENST00000505077 KIR2DL4Q99706 377 aa7.1□□□□□ -1.27
RFC1-210ENST00000505077 ALKBH7Q9BT30 221 aaPredicted RBP7.1□□□□□ -1.27
RFC1-210ENST00000505077 PKIAP61925 76 aa7.09□□□□□ -1.27
RFC1-210ENST00000505077 COTL1Q14019 142 aa7.09□□□□□ -1.27
RFC1-210ENST00000505077 LELP1Q5T871 98 aa7.09□□□□□ -1.27
RFC1-210ENST00000505077 LYPD5Q6UWN5 251 aa7.09□□□□□ -1.27
RFC1-210ENST00000505077 UPK3BQ9BT76 320 aa7.09□□□□□ -1.27
RFC1-210ENST00000505077 NXT2Q9NPJ8 142 aaKnown RBP7.09□□□□□ -1.27
RFC1-210ENST00000505077 MRPS16Q9Y3D3 137 aaKnown RBP7.09□□□□□ -1.27
RFC1-210ENST00000505077 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
RFC1-210ENST00000505077 TRBV25-1A0A075B6N4 114 aa7.08□□□□□ -1.28
RFC1-210ENST00000505077 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
RFC1-210ENST00000505077 TRGC2P03986 189 aa7.08□□□□□ -1.28
RFC1-210ENST00000505077 IQCJQ1A5X6 159 aa7.08□□□□□ -1.28
RFC1-210ENST00000505077 KIAA1644Q3SXP7 199 aa7.08□□□□□ -1.28
RFC1-210ENST00000505077 TRAV8-6A0A0B4J262 113 aa7.07□□□□□ -1.28
RFC1-210ENST00000505077 IGHV1-24A0A0C4DH33 117 aa7.07□□□□□ -1.28
RFC1-210ENST00000505077 FCER1GP30273 86 aa7.07□□□□□ -1.28
RFC1-210ENST00000505077 ESRGQ1W209 222 aa7.07□□□□□ -1.28
RFC1-210ENST00000505077 LGALS9CQ6DKI2 356 aa7.07□□□□□ -1.28
RFC1-210ENST00000505077 UBE2DNLQ8IWF7 75 aa7.07□□□□□ -1.28
RFC1-210ENST00000505077 Q8N8P6 123 aa7.07□□□□□ -1.28
RFC1-210ENST00000505077 IGLV2-18A0A075B6J9 118 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 H7C423 109 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 K7EP13 123 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 TSHBP01222 138 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 G0S2P27469 103 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 AMTP48728 403 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 RAB5BP61020 215 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 SMAGPQ0VAQ4 97 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 LINC00588Q9Y4M8 146 aa7.06□□□□□ -1.28
RFC1-210ENST00000505077 LINC01546A6NGU7 62 aa7.05□□□□□ -1.28
RFC1-210ENST00000505077 ORMDL2Q53FV1 153 aa7.05□□□□□ -1.28
RFC1-210ENST00000505077 TMEM243Q9BU79 118 aa7.05□□□□□ -1.28
RFC1-210ENST00000505077 CHCHD7Q9BUK0 85 aa7.05□□□□□ -1.28
RFC1-210ENST00000505077 LOC389332A0A1B0GUA5 103 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 LINC01549A6NIU2 74 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 UBE2L6O14933 153 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 DNAH10OSP0CZ25 163 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 Q0VG73 95 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 LAGE3Q14657 143 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 FA2HQ7L5A8 372 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 PRSS3P2Q8NHM4 247 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 LINC00476Q8WZB0 136 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 TMEM18Q96B42 140 aa7.04□□□□□ -1.28
RFC1-210ENST00000505077 C1orf196B1AJZ1 125 aa7.03□□□□□ -1.28
RFC1-210ENST00000505077 SIVA1O15304 175 aa7.03□□□□□ -1.28
RFC1-210ENST00000505077 ESDP10768 282 aa7.03□□□□□ -1.28
RFC1-210ENST00000505077 ZNF25P17030 456 aaPredicted RBP7.03□□□□□ -1.28
RFC1-210ENST00000505077 MALP21145 153 aa7.03□□□□□ -1.28
RFC1-210ENST00000505077 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
RFC1-210ENST00000505077 LINC01556Q5JQF7 62 aa7.03□□□□□ -1.28
RFC1-210ENST00000505077 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
RFC1-210ENST00000505077 CHCHD5Q9BSY4 110 aa7.03□□□□□ -1.28
RFC1-210ENST00000505077 ALMS1Q8TCU4 4167 aa7.03□□□□□ -1.28
RFC1-210ENST00000505077 HIST1H2BKO60814 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BJP06899 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BOP23527 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BBP33778 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BDP58876 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BCP62807 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST2H2BEQ16778 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 TTC32Q5I0X7 151 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.02□□□□□ -1.29
RFC1-210ENST00000505077 NIT1Q86X76 327 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 BAGE3Q86Y29 109 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 WFDC10BQ8IUB3 73 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 C10orf126Q8N4M7 172 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 C20orf203Q8NBC4 194 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BHQ93079 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BNQ99877 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 HIST1H2BMQ99879 126 aa7.02□□□□□ -1.29
RFC1-210ENST00000505077 TRAV9-2A0A087WT02 112 aa7.01□□□□□ -1.29
RFC1-210ENST00000505077 A0A087WX48 190 aa7.01□□□□□ -1.29
RFC1-210ENST00000505077 A0A1B0GUV1 79 aa7.01□□□□□ -1.29
RFC1-210ENST00000505077 LINC00614P0C842 121 aa7.01□□□□□ -1.29
RFC1-210ENST00000505077 MRPL52Q86TS9 123 aaKnown RBP7.01□□□□□ -1.29
RFC1-210ENST00000505077 TIMM21Q9BVV7 248 aa7.01□□□□□ -1.29
RFC1-210ENST00000505077 CYSLTR1Q9Y271 337 aa7.01□□□□□ -1.29
RFC1-210ENST00000505077 CSDC2Q9Y534 153 aaKnown RBP7.01□□□□□ -1.29
RFC1-210ENST00000505077 NPSP0C0P6 89 aa7□□□□□ -1.29
RFC1-210ENST00000505077 AMMECR1LQ6DCA0 310 aa7□□□□□ -1.29
RFC1-210ENST00000505077 RNASEKQ6P5S7 137 aaKnown RBP7□□□□□ -1.29
RFC1-210ENST00000505077 Q9H8V8 135 aa7□□□□□ -1.29
RFC1-210ENST00000505077 SPANXA1Q9NS26 97 aa7□□□□□ -1.29
RFC1-210ENST00000505077 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
RFC1-210ENST00000505077 LCE6AA0A183 80 aa6.99□□□□□ -1.29
RFC1-210ENST00000505077 LY6G6CO95867 125 aa6.99□□□□□ -1.29
RFC1-210ENST00000505077 FGF6P10767 208 aa6.99□□□□□ -1.29
RFC1-210ENST00000505077 BTF3P20290 206 aaKnown RBP6.99□□□□□ -1.29
RFC1-210ENST00000505077 TMEM101Q96IK0 257 aa6.99□□□□□ -1.29
RFC1-210ENST00000505077 PYGO1Q9Y3Y4 419 aa6.99□□□□□ -1.29
RFC1-210ENST00000505077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.98□□□□□ -1.29
RFC1-210ENST00000505077 IGKV2-29A2NJV5 120 aaPredicted RBP6.98□□□□□ -1.29
RFC1-210ENST00000505077 TMEM262E9PQX1 116 aa6.98□□□□□ -1.29
RFC1-210ENST00000505077 HSBP1O75506 76 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms