RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 STPG4Q8N801 248 aa7.62□□□□□ -1.19
NEDD9-209ENST00000504634 PRSS3P2Q8NHM4 247 aa7.62□□□□□ -1.19
NEDD9-209ENST00000504634 PGLYRP4Q96LB8 373 aa7.62□□□□□ -1.19
NEDD9-209ENST00000504634 RPL35P42766 123 aaKnown RBP7.61□□□□□ -1.19
NEDD9-209ENST00000504634 RPS20P60866 119 aaKnown RBP7.61□□□□□ -1.19
NEDD9-209ENST00000504634 COTL1Q14019 142 aa7.61□□□□□ -1.19
NEDD9-209ENST00000504634 C15orf56Q8N910 161 aa7.61□□□□□ -1.19
NEDD9-209ENST00000504634 OR2D3Q8NGH3 330 aa7.61□□□□□ -1.19
NEDD9-209ENST00000504634 MBD3L1Q8WWY6 194 aa7.61□□□□□ -1.19
NEDD9-209ENST00000504634 NIT2Q9NQR4 276 aa7.61□□□□□ -1.19
NEDD9-209ENST00000504634 UMAD1C9J7I0 102 aa7.6□□□□□ -1.19
NEDD9-209ENST00000504634 TRGC1P0CF51 173 aa7.6□□□□□ -1.19
NEDD9-209ENST00000504634 IGLC6P0CF74 106 aa7.6□□□□□ -1.19
NEDD9-209ENST00000504634 ODF1Q14990 250 aa7.6□□□□□ -1.19
NEDD9-209ENST00000504634 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
NEDD9-209ENST00000504634 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
NEDD9-209ENST00000504634 XKRY2A2RUG3 117 aa7.59□□□□□ -1.19
NEDD9-209ENST00000504634 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
NEDD9-209ENST00000504634 AMMECR1LQ6DCA0 310 aa7.59□□□□□ -1.19
NEDD9-209ENST00000504634 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-209ENST00000504634 F2Z2F3 143 aa7.58□□□□□ -1.2
NEDD9-209ENST00000504634 CENPWQ5EE01 88 aa7.58□□□□□ -1.2
NEDD9-209ENST00000504634 RNASEKQ6P5S7 137 aaKnown RBP7.58□□□□□ -1.2
NEDD9-209ENST00000504634 SPINK6Q6UWN8 80 aa7.58□□□□□ -1.2
NEDD9-209ENST00000504634 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
NEDD9-209ENST00000504634 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-209ENST00000504634 G3V3Q6 166 aa7.57□□□□□ -1.2
NEDD9-209ENST00000504634 IFNA1P01562 189 aa7.57□□□□□ -1.2
NEDD9-209ENST00000504634 LYZL1Q6UWQ5 148 aa7.57□□□□□ -1.2
NEDD9-209ENST00000504634 Q6ZNX1 250 aa7.57□□□□□ -1.2
NEDD9-209ENST00000504634 PKIGQ9Y2B9 76 aa7.57□□□□□ -1.2
NEDD9-209ENST00000504634 A0A096LNI7 61 aa7.56□□□□□ -1.2
NEDD9-209ENST00000504634 NTF3P20783 257 aa7.56□□□□□ -1.2
NEDD9-209ENST00000504634 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
NEDD9-209ENST00000504634 GNG13Q9P2W3 67 aa7.56□□□□□ -1.2
NEDD9-209ENST00000504634 SMLR1H3BR10 107 aa7.55□□□□□ -1.2
NEDD9-209ENST00000504634 GNG4P50150 75 aa7.55□□□□□ -1.2
NEDD9-209ENST00000504634 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
NEDD9-209ENST00000504634 TWIST1Q15672 202 aa7.55□□□□□ -1.2
NEDD9-209ENST00000504634 C11orf52Q96A22 123 aa7.55□□□□□ -1.2
NEDD9-209ENST00000504634 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-209ENST00000504634 TRAV26-2A0A0B4J265 109 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 KANTRA0A1W2PQU2 76 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 IGKV2-29A2NJV5 120 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-209ENST00000504634 RAB19A4D1S5 217 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 C19orf71A6NCJ1 209 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 APCSP02743 223 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 XCL1P47992 114 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 ZNF345Q14585 488 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 Q6ZRP5 223 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 BIN3Q9NQY0 253 aa7.54□□□□□ -1.2
NEDD9-209ENST00000504634 NCR2O95944 276 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 FGF6P10767 208 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 EIF5AP63241 154 aaKnown RBP7.53□□□□□ -1.2
NEDD9-209ENST00000504634 CCL20P78556 96 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 FOXI1Q12951 378 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 SMIM12Q96EX1 92 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 BTF3L4Q96K17 158 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 CARD19Q96LW7 228 aa7.53□□□□□ -1.2
NEDD9-209ENST00000504634 IGHV1-58A0A0C4DH39 117 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 TEX46H3BTG2 121 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 H7C423 109 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 BCL2L11O43521 198 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 SMIM15Q7Z3B0 74 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 C9orf62Q8N4C0 152 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 TMEM101Q96IK0 257 aa7.52□□□□□ -1.21
NEDD9-209ENST00000504634 ZNF561-AS1K7EIQ3 104 aa7.51□□□□□ -1.21
NEDD9-209ENST00000504634 CTRLP40313 264 aa7.51□□□□□ -1.21
NEDD9-209ENST00000504634 SRSF9Q13242 221 aaKnown RBP eCLIP7.51□□□□□ -1.21
NEDD9-209ENST00000504634 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
NEDD9-209ENST00000504634 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
NEDD9-209ENST00000504634 MED9Q9NWA0 146 aa7.51□□□□□ -1.21
NEDD9-209ENST00000504634 CCL25O15444 150 aa7.5□□□□□ -1.21
NEDD9-209ENST00000504634 PDE6DO43924 150 aa7.5□□□□□ -1.21
NEDD9-209ENST00000504634 ZNF25P17030 456 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-209ENST00000504634 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 HMSDA8MTL9 139 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 MEF2BQ02080 365 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-209ENST00000504634 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 SS18Q15532 418 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 TEX261Q6UWH6 196 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 NUDT10Q8NFP7 164 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 NUDT11Q96G61 164 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 CNFNQ9BYD5 112 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
NEDD9-209ENST00000504634 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
NEDD9-209ENST00000504634 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
NEDD9-209ENST00000504634 I3L3M4 83 aa7.48□□□□□ -1.21
NEDD9-209ENST00000504634 PMCHP20382 165 aa7.48□□□□□ -1.21
NEDD9-209ENST00000504634 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
NEDD9-209ENST00000504634 ISOC2Q96AB3 205 aa7.48□□□□□ -1.21
NEDD9-209ENST00000504634 RPP21Q9H633 154 aaKnown RBP7.48□□□□□ -1.21
NEDD9-209ENST00000504634 TRBV20OR9-2A0A075B6H5 130 aa7.47□□□□□ -1.21
NEDD9-209ENST00000504634 MALP21145 153 aa7.47□□□□□ -1.21
NEDD9-209ENST00000504634 FOXA3P55318 350 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms