RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 BTF3P20290 206 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-208ENST00000504489 POLR2KP53803 58 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-208ENST00000504489 IQCJQ1A5X6 159 aa8.08□□□□□ -1.12
PDLIM5-208ENST00000504489 KRTAP19-1Q8IUB9 90 aa8.08□□□□□ -1.12
PDLIM5-208ENST00000504489 TMEM70Q9BUB7 260 aa8.08□□□□□ -1.12
PDLIM5-208ENST00000504489 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
PDLIM5-208ENST00000504489 RYR3Q15413 4870 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 TRBV25-1A0A075B6N4 114 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 IGHV1-24A0A0C4DH33 117 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 D6R8Y8 96 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 COTL1Q14019 142 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 COX19Q49B96 90 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 TMEM136Q6ZRR5 245 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 NIT1Q86X76 327 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 C10orf126Q8N4M7 172 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 GNB1LQ9BYB4 327 aa8.07□□□□□ -1.12
PDLIM5-208ENST00000504489 TRBV27A0A0K0K1C4 114 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 I3L3M4 83 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 VCYO14598 125 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 PHOX2AO14813 284 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 HLA-DQA1P01909 254 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 PMCHP20382 165 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 PKIAP61925 76 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 SUMO2P61956 95 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 RPL32P62910 135 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 C1orf134Q5TEV5 83 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 ATRAIDQ6UW56 229 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 ORMDL3Q8N138 153 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 CHCHD7Q9BUK0 85 aa8.06□□□□□ -1.12
PDLIM5-208ENST00000504489 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 ELOBQ15370 118 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 TMEM243Q9BU79 118 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 LAMTOR2Q9Y2Q5 125 aa8.05□□□□□ -1.12
PDLIM5-208ENST00000504489 A0A087WX48 190 aa8.04□□□□□ -1.12
PDLIM5-208ENST00000504489 IBA57-AS1B1ANH7 110 aa8.04□□□□□ -1.12
PDLIM5-208ENST00000504489 NPYP01303 97 aa8.04□□□□□ -1.12
PDLIM5-208ENST00000504489 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
PDLIM5-208ENST00000504489 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
PDLIM5-208ENST00000504489 TGIF2-C20orf24A0A0A6YYL0 155 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 TMEM262E9PQX1 116 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 TSHBP01222 138 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 APCSP02743 223 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 MT-ND6P03923 174 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 AMTP48728 403 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 YPEL4Q96NS1 127 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 SMCO4Q9NRQ5 59 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 FRAS1Q86XX4 4008 aa8.03□□□□□ -1.12
PDLIM5-208ENST00000504489 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 H7C423 109 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 RTL8CO15255 209 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 TCAPO15273 167 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 ESDP10768 282 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 GAGE6Q13070 117 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 LAGE3Q14657 143 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 MPV17L2Q567V2 206 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 NFE4Q86UQ8 179 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 KIR2DL4Q99706 377 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 SMIM2Q9BVW6 85 aa8.02□□□□□ -1.13
PDLIM5-208ENST00000504489 RBX1P62877 108 aa8.01□□□□□ -1.13
PDLIM5-208ENST00000504489 LINC00336Q6ZUF6 198 aa8.01□□□□□ -1.13
PDLIM5-208ENST00000504489 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
PDLIM5-208ENST00000504489 UBE2L6O14933 153 aa8□□□□□ -1.13
PDLIM5-208ENST00000504489 FCER1GP30273 86 aa8□□□□□ -1.13
PDLIM5-208ENST00000504489 KIAA1644Q3SXP7 199 aa8□□□□□ -1.13
PDLIM5-208ENST00000504489 Q6ZRN7 208 aaPredicted RBP8□□□□□ -1.13
PDLIM5-208ENST00000504489 CBLN2Q8IUK8 224 aa8□□□□□ -1.13
PDLIM5-208ENST00000504489 MAP1LC3AQ9H492 121 aa8□□□□□ -1.13
PDLIM5-208ENST00000504489 KLK12Q9UKR0 248 aa8□□□□□ -1.13
PDLIM5-208ENST00000504489 DNAH2Q9P225 4427 aa7.99□□□□□ -1.13
PDLIM5-208ENST00000504489 TRAV8-3A0A0A6YYJ7 113 aa7.99□□□□□ -1.13
PDLIM5-208ENST00000504489 ANGP03950 147 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-208ENST00000504489 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
PDLIM5-208ENST00000504489 Q8N976 141 aa7.99□□□□□ -1.13
PDLIM5-208ENST00000504489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-208ENST00000504489 IGKV2-29A2NJV5 120 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-208ENST00000504489 Q0VG73 95 aa7.98□□□□□ -1.13
PDLIM5-208ENST00000504489 Q8N8P6 123 aa7.98□□□□□ -1.13
PDLIM5-208ENST00000504489 C20orf203Q8NBC4 194 aa7.98□□□□□ -1.13
PDLIM5-208ENST00000504489 ALKBH7Q9BT30 221 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-208ENST00000504489 TRAPPC1Q9Y5R8 145 aa7.98□□□□□ -1.13
PDLIM5-208ENST00000504489 DNAH17Q9UFH2 4485 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 LOC389332A0A1B0GUA5 103 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 PRSS29PA6NIE9 313 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 K7EMI3 77 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 FGF6P10767 208 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 ZNF25P17030 456 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 RAB5AP20339 215 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 AMMECR1LQ6DCA0 310 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 ENHOQ6UWT2 76 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 MRPL52Q86TS9 123 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 UBE2WQ96B02 151 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms