RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 HIST1H2BJP06899 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BOP23527 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BBP33778 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 AMTP48728 403 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BDP58876 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BCP62807 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST2H2BEQ16778 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 NTM-AS1Q6ZSK4 140 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BHQ93079 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BNQ99877 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BMQ99879 126 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 TENM2Q9NT68 2774 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
CYSTM1-202ENST00000504227 LINC00614P0C842 121 aa9.54□□□□□ -0.88
CYSTM1-202ENST00000504227 LAGE3Q14657 143 aa9.54□□□□□ -0.88
CYSTM1-202ENST00000504227 TMEM243Q9BU79 118 aa9.54□□□□□ -0.88
CYSTM1-202ENST00000504227 ORMDL2Q53FV1 153 aa9.53□□□□□ -0.88
CYSTM1-202ENST00000504227 RNASEKQ6P5S7 137 aaKnown RBP9.53□□□□□ -0.88
CYSTM1-202ENST00000504227 UBE2DNLQ8IWF7 75 aa9.53□□□□□ -0.88
CYSTM1-202ENST00000504227 CHCHD5Q9BSY4 110 aa9.53□□□□□ -0.88
CYSTM1-202ENST00000504227 LINC00588Q9Y4M8 146 aa9.53□□□□□ -0.88
CYSTM1-202ENST00000504227 LINC01546A6NGU7 62 aa9.52□□□□□ -0.89
CYSTM1-202ENST00000504227 G0S2P27469 103 aa9.52□□□□□ -0.89
CYSTM1-202ENST00000504227 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.89
CYSTM1-202ENST00000504227 AP5S1Q9NUS5 200 aa9.52□□□□□ -0.89
CYSTM1-202ENST00000504227 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
CYSTM1-202ENST00000504227 UBE2L6O14933 153 aa9.51□□□□□ -0.89
CYSTM1-202ENST00000504227 ESDP10768 282 aa9.51□□□□□ -0.89
CYSTM1-202ENST00000504227 TMEM18Q96B42 140 aa9.51□□□□□ -0.89
CYSTM1-202ENST00000504227 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
CYSTM1-202ENST00000504227 CSMD3Q7Z407 3707 aa9.51□□□□□ -0.89
CYSTM1-202ENST00000504227 SERF1AO75920 110 aa9.5□□□□□ -0.89
CYSTM1-202ENST00000504227 NDUFA6P56556 154 aa9.5□□□□□ -0.89
CYSTM1-202ENST00000504227 PKIAP61925 76 aa9.5□□□□□ -0.89
CYSTM1-202ENST00000504227 URB1-AS1Q96HZ7 61 aa9.5□□□□□ -0.89
CYSTM1-202ENST00000504227 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 IGKV2-29A2NJV5 120 aaPredicted RBP9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 TMEM262E9PQX1 116 aa9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 H7C423 109 aa9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 SMAGPQ0VAQ4 97 aa9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 GAGE6Q13070 117 aa9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 C20orf203Q8NBC4 194 aa9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 UPK3BQ9BT76 320 aa9.49□□□□□ -0.89
CYSTM1-202ENST00000504227 HSBP1O75506 76 aa9.48□□□□□ -0.89
CYSTM1-202ENST00000504227 BTF3P20290 206 aaKnown RBP9.48□□□□□ -0.89
CYSTM1-202ENST00000504227 AMMECR1LQ6DCA0 310 aa9.48□□□□□ -0.89
CYSTM1-202ENST00000504227 CYSLTR1Q9Y271 337 aa9.48□□□□□ -0.89
CYSTM1-202ENST00000504227 A0A087WX48 190 aa9.47□□□□□ -0.89
CYSTM1-202ENST00000504227 LINC01549A6NIU2 74 aa9.47□□□□□ -0.89
CYSTM1-202ENST00000504227 S100A6P06703 90 aa9.47□□□□□ -0.89
CYSTM1-202ENST00000504227 COA6Q5JTJ3 125 aaKnown RBP9.47□□□□□ -0.89
CYSTM1-202ENST00000504227 LGALS9CQ6DKI2 356 aa9.47□□□□□ -0.89
CYSTM1-202ENST00000504227 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
CYSTM1-202ENST00000504227 WFDC10BQ8IUB3 73 aa9.47□□□□□ -0.89
CYSTM1-202ENST00000504227 SIVA1O15304 175 aa9.46□□□□□ -0.9
CYSTM1-202ENST00000504227 FGF6P10767 208 aa9.46□□□□□ -0.9
CYSTM1-202ENST00000504227 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
CYSTM1-202ENST00000504227 DGAT2L7PQ6IED9 249 aa9.46□□□□□ -0.9
CYSTM1-202ENST00000504227 TMEM101Q96IK0 257 aa9.46□□□□□ -0.9
CYSTM1-202ENST00000504227 Q9H8V8 135 aa9.46□□□□□ -0.9
CYSTM1-202ENST00000504227 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.9
CYSTM1-202ENST00000504227 NUPR1O60356 82 aa9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 HBDP02042 147 aa9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 LINC00310P59036 64 aa9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 PMCHL1Q16048 86 aa9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
CYSTM1-202ENST00000504227 A0A1B0GUV1 79 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 IGHV3-30-3P0DP02 117 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 ZNF25P17030 456 aaPredicted RBP9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 RBX1P62877 108 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 LINC01556Q5JQF7 62 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 FAM19A2Q8N3H0 131 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 SCGB3A1Q96QR1 104 aa9.44□□□□□ -0.9
CYSTM1-202ENST00000504227 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
CYSTM1-202ENST00000504227 LY6G6CO95867 125 aa9.43□□□□□ -0.9
CYSTM1-202ENST00000504227 MPV17L2Q567V2 206 aa9.43□□□□□ -0.9
CYSTM1-202ENST00000504227 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
CYSTM1-202ENST00000504227 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
CYSTM1-202ENST00000504227 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
CYSTM1-202ENST00000504227 A0A096LNJ9 63 aa9.42□□□□□ -0.9
CYSTM1-202ENST00000504227 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
CYSTM1-202ENST00000504227 ERASQ7Z444 233 aa9.42□□□□□ -0.9
CYSTM1-202ENST00000504227 Q8N976 141 aa9.42□□□□□ -0.9
CYSTM1-202ENST00000504227 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
CYSTM1-202ENST00000504227 TMA7Q9Y2S6 64 aaKnown RBP9.42□□□□□ -0.9
CYSTM1-202ENST00000504227 K7EP13 123 aa9.41□□□□□ -0.9
CYSTM1-202ENST00000504227 ANGP03950 147 aaKnown RBP9.41□□□□□ -0.9
CYSTM1-202ENST00000504227 PDZD11Q5EBL8 140 aa9.41□□□□□ -0.9
CYSTM1-202ENST00000504227 Q8N3U1 123 aa9.41□□□□□ -0.9
CYSTM1-202ENST00000504227 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
CYSTM1-202ENST00000504227 TIMM17AQ99595 171 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms